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Task #6328 (closed)

Opened 13 years ago

Closed 13 years ago

Last modified 13 years ago

BUG: EPSReader - Feedback 3892

Reported by: omero-qa Owned by: mlinkert
Priority: minor Milestone: OMERO-Beta4.3.2
Component: from QA Version: n.a.
Keywords: n.a. Cc: bgaertne@…
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: 0.0d
Sprint: 2011-08-04 (2)

Description

http://qa.openmicroscopy.org.uk/qa/feedback/3892/

Comment: what does this error mean? Thanks...

java.lang.NumberFormatException: For input string: "(atend)"
	at java.lang.NumberFormatException.forInputString(NumberFormatException.java:48)
	at java.lang.Integer.parseInt(Integer.java:449)
	at java.lang.Integer.parseInt(Integer.java:499)
	at loci.formats.in.EPSReader.initFile(EPSReader.java:274)
	at loci.formats.FormatReader.setId(FormatReader.java:1072)
	at loci.formats.ImageReader.setId(ImageReader.java:670)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:488)
	at loci.formats.ChannelFiller.setId(ChannelFiller.java:249)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:488)
	at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:257)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:488)
	at ome.formats.importer.ImportLibrary.open(ImportLibrary.java:248)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:402)
	at ome.formats.importer.gui.ImportHandler.importImages(ImportHandler.java:216)
	at ome.formats.importer.gui.ImportHandler.access$100(ImportHandler.java:59)
	at ome.formats.importer.gui.ImportHandler$2.run(ImportHandler.java:134)
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
	at java.util.concurrent.FutureTask.run(FutureTask.java:138)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(ScheduledThreadPoolExecutor.java:98)
	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:206)
	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
	at java.lang.Thread.run(Thread.java:680)

Change History (6)

comment:1 Changed 13 years ago by mlinkert

  • Milestone changed from Unscheduled to OMERO-Beta4.3.2
  • Remaining Time set to 0.2
  • Sprint set to 2011-08-04 (2)

comment:2 Changed 13 years ago by Melissa Linkert <melissa@…>

(In [6659587d70491e46461833b478590f9b2c71be96/bioformats.git]) Throw a more informative exception if non-image files are encountered.

See #6328.

comment:3 Changed 13 years ago by mlinkert

  • Remaining Time changed from 0.2 to 0
  • Resolution set to fixed
  • Status changed from new to closed

This file is not actually supported, as it does not contain real pixel data. A more informative error message should now appear if you attempt to open/import it, so that it is more clear that this is an unsupported file.

See also #4102.

comment:4 Changed 13 years ago by Melissa Linkert <melissa@…>

(In [6659587d70491e46461833b478590f9b2c71be96/bioformats.git]) Throw a more informative exception if non-image files are encountered.

See #6328.

comment:5 Changed 13 years ago by Melissa Linkert <melissa@…>

(In [432880dd5914abb077bfb04b4754ddc047a90963/bioformats.git]) Throw a more informative exception if non-image files are encountered.

See #6328.
(cherry picked from commit 6659587d70491e46461833b478590f9b2c71be96)

comment:6 Changed 13 years ago by Melissa Linkert <melissa@…>

(In [432880dd5914abb077bfb04b4754ddc047a90963/bioformats.git]) Throw a more informative exception if non-image files are encountered.

See #6328.
(cherry picked from commit 6659587d70491e46461833b478590f9b2c71be96)

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