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Task #6415 (closed)

Opened 9 years ago

Closed 9 years ago

BUG: Insight java.lang.RuntimeException

Reported by: atarkowska Owned by: jburel
Priority: critical Milestone: OMERO-Beta4.3.2
Component: Insight Version: n.a.
Keywords: n.a. Cc: jamoore, cxallan
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: 0.0d
Sprint: 2011-09-01 (4)

Description (last modified by atarkowska)

For the first time I've seen this error

java.lang.RuntimeException: omero.InternalException
   serverStackTrace = "ome.conditions.InternalException:  Wrapped Exception: (org.springframework.transaction.TransactionSystemException):
                       Could not roll back JDBC transaction; nested exception is java.sql.SQLException: connection handle already closed
                           at org.springframework.jdbc.datasource.DataSourceTransactionManager.doRollback(DataSourceTransactionManager.java:286)
                           at org.springframework.transaction.support.AbstractPlatformTransactionManager.processRollback(AbstractPlatformTransactionManager.java:845)
                           at org.springframework.transaction.support.AbstractPlatformTransactionManager.rollback(AbstractPlatformTransactionManager.java:822)
                           at org.springframework.transaction.interceptor.TransactionAspectSupport.completeTransactionAfterThrowing(TransactionAspectSupport.java:430)
                           at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:112)
                           at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
                           at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:231)
                           at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
                           at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116)
                           at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
                           at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
                           at $Proxy82.prepare(Unknown Source)
                           at sun.reflect.GeneratedMethodAccessor947.invoke(Unknown Source)
                           at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
                           at java.lang.reflect.Method.invoke(Method.java:597)
                           at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
                           at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
                           at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
...

It seams that Insight started importing from two separates threads in the same time. Normaly Insight is launching Import tag and when you add new files afterwords they will go to new tab and wait. But it this case Insight started improt files listed on both tabs in the same time. First tab was importing Tifs and then I add DV's and dv's started to failed and I still sow analizing spinning bar on Tifs.

Attachments (2)

server_log.txt (1.4 MB) - added by atarkowska 9 years ago.
insight_log.txt (255.7 KB) - added by atarkowska 9 years ago.

Download all attachments as: .zip

Change History (7)

comment:1 Changed 9 years ago by atarkowska

  • Component changed from General to Insight
  • Description modified (diff)

Changed 9 years ago by atarkowska

Changed 9 years ago by atarkowska

comment:2 Changed 9 years ago by atarkowska

  • Priority changed from minor to critical

comment:3 Changed 9 years ago by atarkowska

  • Cc jmoore cxallan added

comment:4 Changed 9 years ago by jburel

  • Sprint changed from 2011-08-18 (3) to 2011-09-01 (4)

Moved from sprint 2011-08-18 (3)

comment:5 Changed 9 years ago by jburel <j.burel@…>

  • Remaining Time set to 0
  • Resolution set to fixed
  • Status changed from new to closed

(In [cff00956d91d86ddb5c37836ad4bebe39c9d58b1/ome.git] on branch develop) Import queue problem:

  • Several imports were starting at the same which generate various errors.
  • Imports should have been in a queue.
  • Improve report of an import i.e. number of files imported, cancel import, failures

(close #6455, #6457, #6415)

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