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Task #6539 (closed)

Opened 8 years ago

Closed 8 years ago

Bug: Batch Annotate in Web

Reported by: jrswedlow Owned by: atarkowska
Priority: critical Milestone: OMERO-Beta4.3.2
Component: Web Version: n.a.
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: 0.0d
Sprint: 2011-09-15 (5)

Description (last modified by atarkowska)

Batch Annotation:

  1. Multi-select images in middle pane.
  1. Tag with with existing tag
  1. Get following error:
Traceback (most recent call last):

  File "/home/omero/OMERO.server-4.3.2-DEV-e9e58218-b2743/lib/python/django/core/handlers/base.py", line 92, in get_response
    response = callback(request, *callback_args, **callback_kwargs)

  File "/home/omero/OMERO.server-4.3.2-DEV-e9e58218-b2743/lib/python/omeroweb/webclient/views.py", line 169, in wrapped
    return f(request, *args, **kwargs)

  File "/home/omero/OMERO.server-4.3.2-DEV-e9e58218-b2743/lib/python/omeroweb/webclient/views.py", line 1322, in manage_annotation_multi
    manager.createAnnotationsLinks('tag', tags, oids)

  File "/home/omero/OMERO.server-4.3.2-DEV-e9e58218-b2743/lib/python/omeroweb/webclient/controller/container.py", line 775, in createAnnotationsLinks
    for ob in self.conn.getObjects(k.lower().title(), oids[k]):

  File "/home/omero/OMERO.server-4.3.2-DEV-e9e58218-b2743/lib/python/omero/gateway/__init__.py", line 2323, in getObjects
    query, params, wrapper = self.buildQuery(obj_type, ids, params, attributes)

  File "/home/omero/OMERO.server-4.3.2-DEV-e9e58218-b2743/lib/python/omero/gateway/__init__.py", line 2363, in buildQuery
    params.map["ids"] = rlist([rlong(a) for a in ids])

  File "/home/omero/OMERO.server-4.3.2-DEV-e9e58218-b2743/lib/python/omero/rtypes.py", line 207, in rlong
    return RLongI(val)

  File "/home/omero/OMERO.server-4.3.2-DEV-e9e58218-b2743/lib/python/omero/rtypes.py", line 530, in __init__
    omero.RLong.__init__(self, long(value))

TypeError: long() argument must be a string or a number, not 'ImageWrapper'


<WSGIRequest
GET:<QueryDict: {u'index': [u'None']}>,
POST:<QueryDict: {u'description': [u''], u'tags': [u'579'], u'image': [u'5152', u'5153', u'5154', u'5157', u'5158', u'5159', u'5162', u'5163', u'5164'], u'content': [u''], u'tag': [u''], u'annotation_file': [u'']}>,
COOKIES:{'sessionid': 'bf0afadfba9b25b5caae0c0e6b896cd0'},
META:{'CONTENT_LENGTH': '1439',
 'CONTENT_TYPE': 'multipart/form-data; boundary=----WebKitFormBoundaryp4nh4EsAFWPJGrSE',
 'DOCUMENT_ROOT': '/var/www',
 'GATEWAY_INTERFACE': 'CGI/1.1',
 'HTTP_ACCEPT': 'text/html,application/xhtml+xml,application/xml;q=0.9,*/*;q=0.8',
 'HTTP_ACCEPT_CHARSET': 'ISO-8859-1,utf-8;q=0.7,*;q=0.3',
 'HTTP_ACCEPT_ENCODING': 'gzip,deflate,sdch',
 'HTTP_ACCEPT_LANGUAGE': 'en-US,en;q=0.8',
 'HTTP_CACHE_CONTROL': 'max-age=0',
 'HTTP_CONNECTION': 'keep-alive',
 'HTTP_COOKIE': 'sessionid=bf0afadfba9b25b5caae0c0e6b896cd0',
 'HTTP_HOST': 'gretzky.openmicroscopy.org.uk',
 'HTTP_ORIGIN': 'http://gretzky.openmicroscopy.org.uk',
 'HTTP_REFERER': 'http://gretzky.openmicroscopy.org.uk/webclient/metadata_details/multiaction/annotatemany/?image=5152&image=5153&image=5154&image=5157&image=5158&image=5159&image=5162&image=5163&image=5164',
 'HTTP_USER_AGENT': 'Mozilla/5.0 (Macintosh; Intel Mac OS X 10_6_7) AppleWebKit/535.1 (KHTML, like Gecko) Chrome/13.0.782.112 Safari/535.1',
 'PATH': '/usr/local/bin:/usr/bin:/bin',
 'PATH_INFO': u'/webclient/metadata_details/multiaction/',
 'PATH_TRANSLATED': '/var/www/omero.fcgi/webclient/metadata_details/multiaction/',
 'QUERY_STRING': 'index=None',
 'REMOTE_ADDR': '89.241.141.24',
 'REMOTE_PORT': '56929',
 'REQUEST_METHOD': 'POST',
 'REQUEST_URI': '/webclient/metadata_details/multiaction/?index=None',
 'SCRIPT_FILENAME': '/var/www/omero.fcgi',
 'SCRIPT_NAME': u'',
 'SERVER_ADDR': '134.36.65.227',
 'SERVER_ADMIN': 'webmaster@localhost',
 'SERVER_NAME': 'gretzky.openmicroscopy.org.uk',
 'SERVER_PORT': '80',
 'SERVER_PROTOCOL': 'HTTP/1.1',
 'SERVER_SIGNATURE': '<address>Apache/2.2.14 (Ubuntu) Server at gretzky.openmicroscopy.org.uk Port 80</address>\n',
 'SERVER_SOFTWARE': 'Apache/2.2.14 (Ubuntu)',
 'wsgi.errors': <flup.server.fcgi_base.TeeOutputStream object at 0x3667b50>,
 'wsgi.input': <flup.server.fcgi_base.InputStream object at 0x3667f10>,
 'wsgi.multiprocess': True,
 'wsgi.multithread': False,
 'wsgi.run_once': False,
 'wsgi.url_scheme': 'http',
 'wsgi.version': (1, 0)}>

Change History (5)

comment:1 Changed 8 years ago by jrswedlow

  • Component changed from General to Web

comment:2 Changed 8 years ago by atarkowska

  • Sprint changed from 2011-09-01 (4) to 2011-09-15 (5)

comment:3 Changed 8 years ago by atarkowska

  • Remaining Time set to 0.5

comment:4 Changed 8 years ago by atarkowska

  • Description modified (diff)

comment:5 Changed 8 years ago by atarkowska

  • Remaining Time changed from 0.5 to 0
  • Resolution set to fixed
  • Status changed from new to closed

fixed in #6652

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