Task #6835 (closed)
BUG:Removing comment from Plate acquisition
| Reported by: | omero-qa | Owned by: | jburel |
|---|---|---|---|
| Priority: | minor | Milestone: | OMERO-Beta4.3.3 |
| Component: | from QA | Version: | n.a. |
| Keywords: | n.a. | Cc: | aleksandrat@… |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | 0.0d |
| Sprint: | n.a. |
Description
http://qa.openmicroscopy.org.uk/qa/feedback/3982/
Comment: I was trying to delete existing comment put on Plate Acquisition
java.lang.Exception: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data.
Cannot delete the object.
at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:911)
at org.openmicroscopy.shoola.env.data.OMEROGateway.deleteObjects(OMEROGateway.java:3003)
at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.saveData(OmeroMetadataServiceImpl.java:1038)
at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationSaver$1.doCall(StructuredAnnotationSaver.java:90)
at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:274)
at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
at java.lang.Thread.run(Thread.java:680)
Caused by: omero.ValidationException
serverStackTrace = "ome.conditions.ValidationException: could not delete: [ome.model.annotations.CommentAnnotation#701]; SQL [delete from annotation where id=?]; constraint [fkplateacquisitionannotationlink_child_annotation]; nested exception is org.hibernate.exception.ConstraintViolationException: could not delete: [ome.model.annotations.CommentAnnotation#701]
at org.springframework.orm.hibernate3.SessionFactoryUtils.convertHibernateAccessException(SessionFactoryUtils.java:637)
at org.springframework.orm.hibernate3.HibernateAccessor.convertHibernateAccessException(HibernateAccessor.java:412)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:117)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:231)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
at $Proxy79.deleteObject(Unknown Source)
at sun.reflect.GeneratedMethodAccessor961.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:83)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
at $Proxy79.deleteObject(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179)
at ome.services.throttling.Callback.run(Callback.java:56)
at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:136)
at ome.services.blitz.impl.UpdateI.deleteObject_async(UpdateI.java:46)
at omero.api._IUpdateTie.deleteObject_async(_IUpdateTie.java:64)
at omero.api._IUpdateDisp.___deleteObject(_IUpdateDisp.java:273)
at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:333)
at IceInternal.Incoming.invoke(Incoming.java:159)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2037)
at Ice.ConnectionI.message(ConnectionI.java:972)
at IceInternal.ThreadPool.run(ThreadPool.java:577)
at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)
"
serverExceptionClass = "ome.conditions.ValidationException"
message = "could not delete: [ome.model.annotations.CommentAnnotation#701]; SQL [delete from annotation where id=?]; constraint [fkplateacquisitionannotationlink_child_annotation]; nested exception is org.hibernate.exception.ConstraintViolationException: could not delete: [ome.model.annotations.CommentAnnotation#701]"
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
at java.lang.Class.newInstance0(Class.java:355)
at java.lang.Class.newInstance(Class.java:308)
at
Change History (5)
comment:1 Changed 8 years ago by jmoore
- Milestone changed from Unscheduled to OMERO-Beta4.3.3
comment:2 Changed 8 years ago by jburel
comment:3 Changed 8 years ago by jburel
- Resolution set to fixed
- Status changed from new to closed
comment:4 Changed 8 years ago by jburel
To Test:
- select a plate acquisition.
- Add a comment
- Save
- Delete the comment.
comment:5 Changed 8 years ago by Jean-marie Burel <j.burel@…>
- Remaining Time set to 0
(In [6455e81d64c588fc668aa3598454fa99855f81bb/ome.git]) Review code to delete an annotation linked to a plate acquisition. (close #6835)
Note: See
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You may also have a look at Agilo extensions to the ticket.
See github branch feature/plateAcquisitionAnnotation