Task #6908 (closed)
BUG:Tagging screening data
Reported by: | omero-qa | Owned by: | jburel |
---|---|---|---|
Priority: | minor | Milestone: | OMERO-Beta4.3.3 |
Component: | Insight | Version: | n.a. |
Keywords: | n.a. | Cc: | jay_copeland@… |
Resources: | n.a. | Referenced By: | n.a. |
References: | n.a. | Remaining Time: | 0.0d |
Sprint: | 2011-10-13 (1) |
Description
http://qa.openmicroscopy.org.uk/qa/feedback/4007/
Comment: Tagging one row of images in a screen.
java.lang.Exception: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. Cannot update the object. at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:911) at org.openmicroscopy.shoola.env.data.OMEROGateway.createObject(OMEROGateway.java:2925) at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.linkAnnotation(OmeroMetadataServiceImpl.java:484) at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.saveData(OmeroMetadataServiceImpl.java:1021) at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationSaver$1.doCall(StructuredAnnotationSaver.java:90) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:274) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680) Caused by: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. Cannot update the object. at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:911) at org.openmicroscopy.shoola.env.data.OMEROGateway.saveAndReturnObject(OMEROGateway.java:3028) at org.openmicroscopy.shoola.env.data.OMEROGateway.createObject(OMEROGateway.java:2923) ... 10 more Caused by: omero.ValidationException serverStackTrace = "ome.conditions.ValidationException: could not insert: [ome.model.annotations.WellSampleAnnotationLink]; SQL [insert into wellsampleannotationlink (child, creation_id, external_id, group_id, owner_id, permissions, update_id, parent, version, id) values (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)]; constraint [wellsampleannotationlink_parent_key]; nested exception is org.hibernate.exception.ConstraintViolationException: could not insert: [ome.model.annotations.WellSampleAnnotationLink] at org.springframework.orm.hibernate3.SessionFactoryUtils.convertHibernateAccessException(SessionFactoryUtils.java:637) at
Change History (5)
comment:1 Changed 12 years ago by jburel
- Component changed from from QA to Insight
- Milestone changed from Unscheduled to OMERO-Beta4.3.3
- Sprint set to 2011-10-13 (1)
comment:2 Changed 12 years ago by jburel
- Status changed from new to accepted
comment:3 Changed 12 years ago by jburel
- Resolution set to fixed
- Status changed from accepted to closed
see github feature/bugsInsight4.3.2 a8e7ccb
comment:4 Changed 12 years ago by jburel
To test:
- Import a plate with several well samples.
- Select few images in the row.
- Tag the selected images
- Now select one by one the images previously selected
- The tag should be attached to each image.
comment:5 Changed 12 years ago by Jean-marie Burel <j.burel@…>
- Remaining Time set to 0
(In [a8e7ccb1b245afede7878448821a64039ce2f797/ome.git]) Make sure that the annotation is linked to the images (from a plate) when a collection if specified. (close #6908)
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The reported error highlighted another issue.
If several images within a plate are selected, then annotated. The annotation will be added to the first image and then to the well sample of the other images in the list.