Task #7325 (closed)
DOC: bin/omero admin restart - failed
| Reported by: | wmoore | Owned by: | jamoore |
|---|---|---|---|
| Priority: | major | Milestone: | OMERO-4.4 |
| Component: | Deployment | Version: | n.a. |
| Keywords: | n.a. | Cc: | cxallan, jburel |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | n.a. |
| Sprint: | 2012-01-17 (6) |
Description (last modified by jmoore)
After opening my laptop...
See comments for diagnostics and $ ps aux
jrs-macbookpro-25107:OMERO will$ omero admin restart error: node `master' couldn't be reached: the node is not active Was the server already stopped? Waiting on shutdown. Use CTRL-C to exit ............................. Failed to shutdown some components after 5 minutes jrs-macbookpro-25107:OMERO will$ omero admin start Server already running jrs-macbookpro-25107:OMERO will$ omero admin diagnostics
See separate but perhaps related issues below for which the solution may be to include retries on certain types of failures.
Change History (10)
comment:1 Changed 13 years ago by wmoore
comment:2 Changed 13 years ago by wmoore
- Owner set to jmoore
================================================================================
OMERO Diagnostics 4.3.3
================================================================================
Commands: java -version 1.6.0 (/usr/bin/java)
Commands: python -V 2.6.1 (/Users/will/apps/OMERO.libs/bin/python -- 2 others)
Commands: icegridnode --version 3.3.1 (/Users/will/apps/OMERO.libs/bin/icegridnode)
Commands: icegridadmin --version 3.3.1 (/Users/will/apps/OMERO.libs/bin/icegridadmin)
Commands: psql --version 9.0.4 (/usr/local/bin/psql)
Server: icegridnode running
Server: Blitz-0 active (pid = 73774, enabled)
Server: DropBox inactive (disabled)
Server: FileServer active (pid = 73776, enabled)
Server: Indexer-0 active (pid = 73777, enabled)
Server: MonitorServer inactive (disabled)
Server: OMERO.Glacier2 active (pid = 73779, enabled)
Server: OMERO.IceStorm active (pid = 73780, enabled)
Server: PixelData-0 active (pid = 73781, enabled)
Server: Processor-0 active (pid = 73782, enabled)
Server: Tables-0 active (pid = 73783, enabled)
Server: TestDropBox inactive (enabled)
Log dir: /Users/will/Desktop/OMERO/dist/var/log exists
Log files: Blitz-0.log 29.0 MB errors=55 warnings=541
Log files: DropBox.log 12.0 KB errors=10 warnings=0
Log files: FileServer.log 3.0 KB
Log files: Indexer-0.log 42.0 KB
Log files: MonitorServer.log 8.0 KB errors=10 warnings=0
Log files: OMEROweb.log 1.0 MB errors=218 warnings=1
Log files: PixelData-0.log 25.0 KB errors=1 warnings=0
Log files: Processor-0.log 874.0 KB errors=0 warnings=329
Log files: Tables-0.log 224.0 KB errors=0 warnings=319
Log files: TestDropBox.log n/a
Log files: master.err 0.0 KB
Log files: master.out 0.0 KB
Log files: Total size 32.07 MB
Parsing Blitz-0.log:[line:30] => Server restarted <=
Parsing Blitz-0.log:[line:50225] => Server restarted <=
Parsing Blitz-0.log:[line:53714] => Server restarted <=
Parsing Blitz-0.log:[line:64630] => Server restarted <=
Parsing Blitz-0.log:[line:79985] => Server restarted <=
Parsing Blitz-0.log:[line:85793] => Server restarted <=
Parsing Blitz-0.log:[line:96678] => Server restarted <=
Parsing Blitz-0.log:[line:100911] => Server restarted <=
Parsing Blitz-0.log:[line:170752] => Server restarted <=
Parsing Blitz-0.log:[line:172077] => Server restarted <=
Environment:OMERO_HOME=/Users/will/Desktop/OMERO/dist
Environment:OMERO_NODE=(unset)
Environment:OMERO_MASTER=(unset)
Environment:PATH=/Users/will/apps/OMERO.libs/Cellar/zeroc-ice33/bin:/usr/local/bin:/Users/will/apps/OMERO.libs/bin:/usr/local/lib/node_modules:/Users/will/Desktop/OMERO/dist/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/X11/bin:/Applications/gitflow/
Environment:ICE_HOME=/Users/will/apps/OMERO.libs/Cellar/zeroc-ice33
Environment:LD_LIBRARY_PATH=(unset)
Environment:DYLD_LIBRARY_PATH=:/Users/will/apps/OMERO.libs/lib
OMERO data dir: '/OMERO' Exists? True Is writable? True
OMERO.web status... Traceback (most recent call last):
File "/Users/will/Desktop/OMERO/dist/bin/omero", line 123, in <module>
rv = omero.cli.argv()
File "/Users/will/Desktop/OMERO/dist/lib/python/omero/cli.py", line 1172, in argv
cli.invoke(args[1:])
File "/Users/will/Desktop/OMERO/dist/lib/python/omero/cli.py", line 722, in invoke
stop = self.onecmd(line, previous_args)
File "/Users/will/Desktop/OMERO/dist/lib/python/omero/cli.py", line 791, in onecmd
self.execute(line, previous_args)
File "/Users/will/Desktop/OMERO/dist/lib/python/omero/cli.py", line 871, in execute
args.func(args)
File "/Users/will/Desktop/OMERO/dist/lib/python/omero/plugins/prefs.py", line 67, in open_and_close_config
return func(*args, **kwargs)
File "/Users/will/Desktop/OMERO/dist/lib/python/omero/plugins/admin.py", line 780, in diagnostics
WebControl().status(args)
File "/Users/will/Desktop/OMERO/dist/lib/python/omero/plugins/web.py", line 391, in status
import omeroweb.settings as settings
ImportError: No module named omeroweb.settings
jrs-macbookpro-25107:OMERO will$ omero config get
omero.web.application_server=development
omero.web.debug=True
comment:3 Changed 13 years ago by wmoore
Another restart problem. This is some work at home with a dodgy internect connection - probably caused the need to restart with IP address change? Then tried restarting the next morning at work (last 2 restarts).
jrs-macbookpro-25107:OMERO will$ omero admin restart error: node `master' couldn't be reached: the node is not active Was the server already stopped? Waiting on shutdown. Use CTRL-C to exit ............................. Failed to shutdown some components after 5 minutes jrs-macbookpro-25107:OMERO will$ omero admin stop Waiting on shutdown. Use CTRL-C to exit .jrs-macbookpro-25107:OMERO will$ omero admin start No descriptor given. Using etc/grid/default.xml Waiting on startup. Use CTRL-C to exit jrs-macbookpro-25107:OMERO will$ omero config set omero.sessions.timeout 20000 jrs-macbookpro-25107:OMERO will$ omero admin restart Waiting on shutdown. Use CTRL-C to exit .No descriptor given. Using etc/grid/default.xml Waiting on startup. Use CTRL-C to exit jrs-macbookpro-25107:OMERO will$ omero admin restart Waiting on shutdown. Use CTRL-C to exit .No descriptor given. Using etc/grid/default.xml Waiting on startup. Use CTRL-C to exit jrs-macbookpro-25107:OMERO will$ tail -f dist/var/log/Blitz-0.log 2011-12-07 23:07:39,004 INFO [ ome.services.util.ServiceHandler] (l.Server-9) Args: [select distinct obj from Experimenter as obj left outer join fetch obj.groupExperimenterMap as map left outer join fetch map.parent g where obj.id in (:ids), PARAMS:ids=ArrayList(1) ] 2011-12-07 23:07:39,005 INFO [ ome.security.basic.EventHandler] (l.Server-9) Auth: user=2,group=3,event=null(User),sess=5ef34d52-1c6f-4020-b3d6-8567e386ac98 2011-12-07 23:07:39,009 INFO [ org.perf4j.TimingLogger] (l.Server-9) start[1323299259004] time[5] tag[omero.call.success.ome.logic.QueryImpl.findByQuery] 2011-12-07 23:07:39,009 INFO [ ome.services.util.ServiceHandler] (l.Server-9) Rslt: ome.model.meta.Experimenter:Id_2 2011-12-07 23:07:39,013 INFO [e.services.sessions.SessionContext$Count] (l.Server-5) -Reference count: 14831435-ff56-46b6-97b3-1f7db16e0847=0 2011-12-07 23:07:39,014 INFO [ ome.services.util.ServiceHandler] (l.Server-0) Meth: interface ome.api.IAdmin.lookupGroup 2011-12-07 23:07:39,014 INFO [ ome.services.util.ServiceHandler] (l.Server-0) Args: [user] 2011-12-07 23:07:39,015 INFO [ ome.security.basic.EventHandler] (l.Server-0) Auth: user=2,group=3,event=null(User),sess=5ef34d52-1c6f-4020-b3d6-8567e386ac98 2011-12-07 23:07:39,039 INFO [ org.perf4j.TimingLogger] (l.Server-0) start[1323299259014] time[25] tag[omero.call.success.ome.logic.AdminImpl.lookupGroup] 2011-12-07 23:07:39,039 INFO [ ome.services.util.ServiceHandler] (l.Server-0) Rslt: ome.model.meta.ExperimenterGroup:Id_1 2011-12-07 23:08:30,035 INFO [ ome.services.util.ServiceHandler] (l.Server-1) Executor.doWork -- ome.services.sessions.SessionManagerImpl.createSession 2011-12-07 23:08:30,035 INFO [ ome.services.util.ServiceHandler] (l.Server-1) Args: [null, InternalSF@1225998403] 2011-12-07 23:08:30,036 INFO [ ome.services.util.ServiceHandler] (l.Server-2) Executor.doWork -- ome.services.sessions.SessionManagerImpl.createSession 2011-12-07 23:08:30,036 INFO [ ome.services.util.ServiceHandler] (l.Server-2) Args: [null, InternalSF@1225998403] 2011-12-07 23:08:30,046 INFO [ ome.security.basic.EventHandler] (l.Server-1) Auth: user=0,group=0,event=51131(Sessions),sess=8ef97cbc-3a22-43e7-a3b6-4905dd252829 2011-12-07 23:08:30,046 INFO [ ome.security.basic.EventHandler] (l.Server-2) Auth: user=0,group=0,event=51132(Sessions),sess=8ef97cbc-3a22-43e7-a3b6-4905dd252829 2011-12-07 23:08:30,057 INFO [ ome.security.basic.CurrentDetails] (l.Server-1) Adding log:INSERT,class ome.model.meta.Session,14271 2011-12-07 23:08:30,057 INFO [ ome.security.basic.CurrentDetails] (l.Server-2) Adding log:INSERT,class ome.model.meta.Session,14272 2011-12-07 23:08:30,067 INFO [ org.perf4j.TimingLogger] (l.Server-1) start[1323299310035] time[32] tag[omero.call.success.ome.services.sessions.SessionManagerImpl$2.doWork] 2011-12-07 23:08:30,067 INFO [ ome.services.util.ServiceHandler] (l.Server-1) Rslt: (ome.model.meta.Experimenter:Id_0, ome.model.meta.ExperimenterGroup:Id_0, [0, 1], ... 4 more) 2011-12-07 23:08:30,067 INFO [ org.perf4j.TimingLogger] (l.Server-2) start[1323299310036] time[31] tag[omero.call.success.ome.services.sessions.SessionManagerImpl$2.doWork] 2011-12-07 23:08:30,067 INFO [ ome.services.util.ServiceHandler] (l.Server-2) Rslt: (ome.model.meta.Experimenter:Id_0, ome.model.meta.ExperimenterGroup:Id_0, [0, 1], ... 4 more) 2011-12-07 23:08:30,068 INFO [ ome.services.blitz.fire.SessionManagerI] (l.Server-1) Created session ServiceFactoryI(session-4c1a3040-c157-4aec-aa5a-3d75e05ada8e/e015e67d-5b49-4302-82c4-14a8fc08ba77) for user root (agent=Python service) 2011-12-07 23:08:30,068 INFO [ ome.services.blitz.fire.SessionManagerI] (l.Server-2) Created session ServiceFactoryI(session-ee18ac57-d52b-4e94-a55d-f62509fed456/55102c50-27c8-4d03-8b15-276da0e99186) for user root (agent=Python service) 2011-12-07 23:08:30,069 INFO [ ome.services.blitz.impl.ServiceFactoryI] (l.Server-0) Added servant to adapter: 55102c50-27c8-4d03-8b15-276da0e99186/ee18ac57-d52b-4e94-a55d-f62509fed456omero.grid.SharedResources(omero.grid._SharedResourcesTie@49e3c996) 2011-12-07 23:08:53,833 INFO [ ome.services.blitz.impl.ServiceFactoryI] (l.Server-7) Added servant to adapter: 5ef34d52-1c6f-4020-b3d6-8567e386ac98/f8e4838e-517e-4c8e-8053-d0bf21a69da9omero.api.IConfig(omero.api._IConfigTie@1833b96c) 2011-12-07 23:09:00,018 INFO [ ome.services.blitz.fire.SessionManagerI] (3-thread-1) Performing requestHeartbeats ^C jrs-macbookpro-25107:OMERO will$ git status # On branch ajax_helper # Changes not staged for commit: # (use "git add <file>..." to update what will be committed) # (use "git checkout -- <file>..." to discard changes in working directory) # # modified: components/tools/OmeroWeb/omeroweb/common/static/common/javascript/popup.js # modified: components/tools/OmeroWeb/omeroweb/webclient/templates/webclient/annotations/metadata_general.html # no changes added to commit (use "git add" and/or "git commit -a") jrs-macbookpro-25107:OMERO will$ omero admin restart Waiting on shutdown. Use CTRL-C to exit ......No descriptor given. Using etc/grid/default.xml icegridnode: failure occurred in daemon: service caught unhandled Ice exception: FileUtil.cpp:477: IceUtil::FileLockedException: could not lock file: `var/registry/__Freeze/lock' syscall exception: Resource temporarily unavailable jrs-macbookpro-25107:OMERO will$ omero admin restart Server not running No descriptor given. Using etc/grid/default.xml Waiting on startup. Use CTRL-C to exit jrs-macbookpro-25107:OMERO will$
comment:4 Changed 13 years ago by wmoore
master.err for restart above
jrs-macbookpro-25107:OMERO will$ cat dist/var/log/master.err
-! 12/2/11 09:26:37:548 warning: Blitz-0-Ice.ThreadPool.Server-6: dispatch exception:
identity: session-aba9b137-b6ac-4baf-84f9-d6e254edc562/a4a6d8ac-fd16-4306-bc09-d846d39fb82e
facet:
operation: destroy
remote host: 10.12.2.172 remote port: 61057
Ice.ObjectAdapterDeactivatedException
name = "BlitzAdapter"
at Ice.ObjectAdapterI.checkForDeactivation(ObjectAdapterI.java:1121)
at Ice.ObjectAdapterI.findFacet(ObjectAdapterI.java:505)
at Ice.ObjectAdapterI.find(ObjectAdapterI.java:499)
at ome.services.blitz.impl.ServiceFactoryI.unregisterServant(ServiceFactoryI.java:1005)
at ome.services.blitz.impl.ServiceFactoryI.doDestroy(ServiceFactoryI.java:801)
at ome.services.blitz.impl.ServiceFactoryI.destroy(ServiceFactoryI.java:703)
at Glacier2._SessionDisp.___destroy(_SessionDisp.java:104)
at omero.api._ServiceFactoryDisp.__dispatch(_ServiceFactoryDisp.java:1412)
at IceInternal.Incoming.invoke(Incoming.java:159)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2357)
at Ice.ConnectionI.dispatch(ConnectionI.java:1208)
at Ice.ConnectionI.message(ConnectionI.java:1163)
at IceInternal.ThreadPool.run(ThreadPool.java:302)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:643)
at java.lang.Thread.run(Thread.java:680)
-! 12/2/11 09:26:37:548 warning: Blitz-0-Ice.ThreadPool.Server-5: dispatch exception:
identity: session-d1004155-2312-4e2d-9042-a3d79f83a18a/59d84cf8-ee11-44a3-9b02-0391ccc4cca8
facet:
operation: destroy
remote host: 10.12.2.172 remote port: 61054
Ice.ObjectAdapterDeactivatedException
name = "BlitzAdapter"
at Ice.ObjectAdapterI.checkForDeactivation(ObjectAdapterI.java:1121)
at Ice.ObjectAdapterI.findFacet(ObjectAdapterI.java:505)
at Ice.ObjectAdapterI.find(ObjectAdapterI.java:499)
at ome.services.blitz.impl.ServiceFactoryI.unregisterServant(ServiceFactoryI.java:1005)
at ome.services.blitz.impl.ServiceFactoryI.doDestroy(ServiceFactoryI.java:801)
at ome.services.blitz.impl.ServiceFactoryI.destroy(ServiceFactoryI.java:703)
at Glacier2._SessionDisp.___destroy(_SessionDisp.java:104)
at omero.api._ServiceFactoryDisp.__dispatch(_ServiceFactoryDisp.java:1412)
at IceInternal.Incoming.invoke(Incoming.java:159)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2357)
at Ice.ConnectionI.dispatch(ConnectionI.java:1208)
at Ice.ConnectionI.message(ConnectionI.java:1163)
at IceInternal.ThreadPool.run(ThreadPool.java:302)
at IceInternal.ThreadPool.access$300(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:643)
at java.lang.Thread.run(Thread.java:680)
!! 12/03/11 21:01:41.518 icegridnode: error: service caught unhandled Ice exception:
FileUtil.cpp:477: IceUtil::FileLockedException:
could not lock file: `var/registry/__Freeze/lock'
syscall exception: Resource temporarily unavailable
-! 12/04/11 08:08:59.944 OMERO.Glacier2: warning: dispatch exception: Network.cpp:1178: Ice::ConnectFailedException:
connect failed: No route to host
identity: session-71ca903c-cd65-49b5-a224-b60676209eec/8322950c-2c74-4bda-9810-f9398c25d47d
facet:
operation: keepAllAlive
remote host: 127.0.0.1 remote port: 51739
-! 12/04/11 08:08:59.955 OMERO.Glacier2: warning: dispatch exception: Network.cpp:1178: Ice::ConnectFailedException:
connect failed: No route to host
identity: session-63dbf2f0-9c1e-4425-b624-d09f08e0b1ea/8322950c-2c74-4bda-9810-f9398c25d47d
facet:
operation: keepAllAlive
remote host: 127.0.0.1 remote port: 51742
-! 12/04/11 08:10:04.957 OMERO.Glacier2: warning: dispatch exception: Network.cpp:1184: Ice::SocketException:
socket exception: Host is down
identity: session-71ca903c-cd65-49b5-a224-b60676209eec/8322950c-2c74-4bda-9810-f9398c25d47d
facet:
operation: keepAllAlive
remote host: 127.0.0.1 remote port: 51739
-! 12/04/11 08:10:04.958 OMERO.Glacier2: warning: dispatch exception: Network.cpp:1184: Ice::SocketException:
socket exception: Host is down
identity: session-63dbf2f0-9c1e-4425-b624-d09f08e0b1ea/8322950c-2c74-4bda-9810-f9398c25d47d
facet:
operation: keepAllAlive
remote host: 127.0.0.1 remote port: 51742
!! 12/08/11 09:43:45.229 icegridnode: error: service caught unhandled Ice exception:
FileUtil.cpp:477: IceUtil::FileLockedException:
could not lock file: `var/registry/__Freeze/lock'
syscall exception: Resource temporarily unavailable
comment:5 Changed 13 years ago by jmoore
- Description modified (diff)
comment:6 Changed 13 years ago by jmoore
- Cc cxallan added
Working through this, Will, the only way that this print out can take place is if "ping node" passes but "shutdown node" fails. I could capture the "node is not active" message (not terribly robust) and then what? Do we offer to the user how to kill the process?
The process "5825" cannot be stopped. Use "kill 5825" ...
Thoughts? Adding Chris to the conversation.
comment:7 Changed 13 years ago by jmoore
- Cc jburel added
- Sprint set to 2012-01-17 (6)
- Status changed from new to accepted
- Summary changed from Bug: bin/omero admin restart - failed to DOC: bin/omero admin restart - failed
Like #5576, this is a developer only issue. Adding to FAQ as solution for both of these.
comment:8 Changed 13 years ago by jmoore
- Resolution set to fixed
- Status changed from accepted to closed
Added to troubleshooting.
comment:9 Changed 13 years ago by jmoore <josh@…>
(In [b04ee7b866e2b94e33bd9ec66581e3bb5b3b7c43/ome.git] on branch develop) Failing test shutdown (See #7325)
comment:10 Changed 13 years ago by jmoore <josh@…>
(In [d84045cfcd7a5155dec4b7aea1ee8a25f64577cc/ome.git] on branch develop) Try adding restart wait (See #7325)
Note: See
TracTickets for help on using
tickets.
You may also have a look at Agilo extensions to the ticket.
jrs-macbookpro-25107:OMERO will$ ps auxw USER PID %CPU %MEM VSZ RSS TT STAT STARTED TIME COMMAND will 73605 7.2 4.4 4306468 369220 ?? S 3:33pm 14:46.81 /Applications/Firefox.app/Contents/MacOS/firefox -foreground will 73638 1.7 0.9 641356 71620 ?? S 3:45pm 1:26.52 /Applications/Firefox.app/Contents/MacOS/plugin-container.app/Contents/MacOS/plugin-container /Library/Internet Plug-Ins/Flash Player.plugin -greomni /Applicat _windowserver 70 1.6 3.8 3494576 318352 ?? Ss 14Oct11 334:49.04 /System/Library/Frameworks/ApplicationServices.framework/Frameworks/CoreGraphics.framework/Resources/WindowServer -daemon will 73777 0.7 3.5 3182704 289444 ?? S 9:32pm 1:19.62 /usr/bin/java -Xmx256M -Djava.awt.headless=true -Dlog4j.configuration=etc/log4j-indexing.xml -Domero.logfile=var/log/${omero.name}.log -Domero.name=Indexer-0 - will 73781 0.4 4.9 3191024 413692 ?? S 9:32pm 1:21.22 /usr/bin/java -Xmx256M -Djava.awt.headless=true -Dlog4j.configuration=etc/log4j-indexing.xml -Domero.logfile=var/log/${omero.name}.log -Domero.name=PixelData-0 will 185 0.3 1.0 2885704 85716 ?? R 14Oct11 11:37.40 /Applications/Utilities/Terminal.app/Contents/MacOS/Terminal -psn_0_81940 will 73774 0.3 5.5 3526992 463028 ?? S 9:32pm 1:42.65 /usr/bin/java -Xmx512M -XX:MaxPermSize=128m -Djava.awt.headless=true -Dlog4j.configuration=etc/log4j.xml -Domero.logfile=var/log/${omero.name}.log -Domero.name will 74179 0.2 0.6 2561660 53564 s000 S+ 11:20pm 1:19.52 /Users/will/apps/OMERO.libs/bin/python manage.py runserver 0.0.0.0:8000 will 73801 0.1 0.1 2446780 8256 ?? Ss 9:32pm 0:05.58 postgres: omero omero 127.0.0.1(61326) idle will 73783 0.1 0.5 2553748 38024 ?? S 9:32pm 0:14.57 python lib/python/runTables.py --Ice.Config=/Users/will/Desktop/OMERO/dist/var/master/servers/Tables-0/config/config will 73800 0.1 0.1 2447548 9724 ?? Ss 9:32pm 0:04.04 postgres: omero omero 127.0.0.1(61323) idle will 8408 0.1 0.2 568068 17636 ?? S 19Oct11 35:33.43 /Applications/Snapz Pro X/Snapz Pro X.app/Contents/MacOS/Snapz Pro X -psn_0_1511793 will 73782 0.1 0.5 2553772 38644 ?? S 9:32pm 0:14.61 python lib/python/runProcessor.py --Ice.Config=/Users/will/Desktop/OMERO/dist/var/master/servers/Processor-0/config/config will 70005 0.0 0.4 2470688 33916 s000 S+ Wed08am 0:00.54 python manage.py runserver 0.0.0.0:8000 will 67695 0.0 0.0 2435548 1132 s004 S Tue09am 0:00.03 -bash root 67694 0.0 0.0 2436216 1644 s004 Ss Tue09am 0:00.03 login -pf will will 67687 0.0 0.0 2434976 604 s002 S+ Tue09am 0:00.03 more will 66020 0.0 0.0 2435548 1132 s003 S+ Mon09pm 0:00.08 -bash root 66019 0.0 0.0 2436216 1644 s003 Ss Mon09pm 0:00.02 login -pf will will 63942 0.0 0.0 2435548 1096 s005 S+ Mon09am 0:00.01 -bash root 63941 0.0 0.0 2436216 1644 s005 Ss Mon09am 0:00.02 login -pf will will 63877 0.0 4.5 924692 377068 ?? S Mon09am 15:56.86 /Applications/TextMate.app/Contents/MacOS/TextMate -psn_0_6608461 will 61264 0.0 0.7 2590216 58636 ?? SNs Fri09pm 0:32.71 /System/Library/Frameworks/CoreServices.framework/Frameworks/Metadata.framework/Versions/A/Support/mdworker MDSImporterWorker com.apple.Spotlight.ImporterWorke will 61195 0.0 0.3 2836852 21980 ?? S Fri09pm 0:19.52 /System/Library/CoreServices/SystemUIServer.app/Contents/MacOS/SystemUIServer will 58467 0.0 0.2 2830332 15580 ?? S Fri12pm 0:03.97 /Applications/Stickies.app/Contents/MacOS/Stickies -psn_0_6161888 will 57767 0.0 0.0 2435548 1104 s000 S Fri09am 0:00.01 -bash root 57766 0.0 0.0 2436216 1644 s000 Ss Fri09am 0:00.01 login -pf will will 40085 0.0 1.3 692384 111228 ?? S 9Nov11 26:09.98 /Applications/Adium.app/Contents/MacOS/Adium -psn_0_4809878 will 38850 0.0 0.1 2447652 7076 ?? Ss 7Nov11 0:00.05 postgres: will omero [local] idle will 38848 0.0 0.0 2436880 1992 s002 S+ 7Nov11 0:00.04 psql omero _www 28053 0.0 0.0 2438072 584 ?? S 31Oct11 0:00.00 /usr/sbin/httpd -D FOREGROUND _www 28044 0.0 0.0 2438072 1464 ?? S 31Oct11 0:00.01 /usr/sbin/httpd -D FOREGROUND root 28040 0.0 0.0 2438072 1996 ?? Ss 31Oct11 0:19.30 /usr/sbin/httpd -D FOREGROUND will 16596 0.0 0.0 2435548 772 s002 S 25Oct11 0:00.19 -bash root 16595 0.0 0.0 2436216 752 s002 Ss 25Oct11 0:00.01 login -pf will will 7864 0.0 0.0 2435548 968 s001 S 19Oct11 0:03.86 -bash root 7863 0.0 0.0 2436216 752 s001 Ss 19Oct11 0:00.01 login -pf will will 682 0.0 2.3 4147296 189304 ?? S 14Oct11 45:49.43 /Applications/Mail.app/Contents/MacOS/Mail -psn_0_114716 will 336 0.0 0.0 2485208 1568 ?? S 14Oct11 0:04.60 /usr/bin/ssh-agent -l will 284 0.0 0.2 2529632 12900 ?? S 14Oct11 1:31.89 /System/Library/Services/AppleSpell.service/Contents/MacOS/AppleSpell -psn_0_106522 will 167 0.0 0.0 2441760 404 ?? Ss 14Oct11 0:59.11 postgres: stats collector process will 166 0.0 0.0 2445860 3900 ?? Ss 14Oct11 0:40.29 postgres: autovacuum launcher process will 165 0.0 0.0 2445728 384 ?? Ss 14Oct11 2:30.23 postgres: wal writer process will 164 0.0 0.0 2445728 3436 ?? Ss 14Oct11 3:31.57 postgres: writer process root 155 0.0 0.0 427400 2804 ?? S 14Oct11 0:12.09 /Library/KeyAccess/KeyAccess.app/Contents/SharedSupport/kass.app/Contents/MacOS/kass -psn_0_65552 will 151 0.0 0.0 2771432 1788 ?? S 14Oct11 0:05.67 /System/Library/CoreServices/RemoteManagement/AppleVNCServer.bundle/Contents/MacOS/AppleVNCServer will 145 0.0 0.0 2445728 1364 ?? S 14Oct11 0:09.42 /usr/local/Cellar/postgresql/9.0.4/bin/postgres -D /usr/local/var/postgres -r /usr/local/var/postgres/server.log will 143 0.0 0.1 431464 5240 ?? S 14Oct11 2:08.26 /Library/KeyAccess/KeyAccess.app/Contents/MacOS/KeyAccess will 142 0.0 0.0 464856 1932 ?? S 14Oct11 0:42.65 /Library/Printers/Canon/UFR2/Utilities/UFR II BackGrounder.app/Contents/MacOS/UFR II BackGrounder will 141 0.0 0.0 2809256 3200 ?? S 14Oct11 0:05.47 /System/Library/CoreServices/AirPort Base Station Agent.app/Contents/MacOS/AirPort Base Station Agent -launchd -allowquit will 136 0.0 0.1 2790592 7180 ?? S 14Oct11 1:20.89 /System/Library/CoreServices/RemoteManagement/ARDAgent.app/Contents/MacOS/ARDAgent will 133 0.0 0.1 2798916 7740 ?? S 14Oct11 0:10.15 /usr/libexec/UserEventAgent -l Aqua will 126 0.0 0.2 2754492 20016 ?? S 14Oct11 0:59.14 /System/Library/Frameworks/ApplicationServices.framework/Frameworks/ATS.framework/Support/fontd will 124 0.0 0.0 2436088 552 ?? S 14Oct11 0:00.02 /usr/sbin/pboard will 122 0.0 1.4 3060200 116524 ?? S 14Oct11 9:47.25 /System/Library/CoreServices/Finder.app/Contents/MacOS/Finder will 120 0.0 0.3 2887940 27276 ?? S 14Oct11 33:22.42 /System/Library/CoreServices/Dock.app/Contents/MacOS/Dock will 116 0.0 0.0 2511668 1364 ?? Ss 14Oct11 0:36.72 /sbin/launchd _coreaudiod 99 0.0 0.1 2517712 8480 ?? Ss 14Oct11 0:23.40 /usr/sbin/coreaudiod root 85 0.0 0.0 2444508 864 ?? Ss 14Oct11 0:00.07 /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/cvmsServ root 52 0.0 0.0 160460 3656 ?? Ss 14Oct11 0:27.35 /Library/KeyAccess/KeyAccess.app/Contents/SharedSupport/karl.app/Contents/MacOS/karl -c root 49 0.0 0.0 2461692 820 ?? Ss 14Oct11 0:03.70 autofsd root 43 0.0 0.0 2434864 496 ?? Ss 14Oct11 0:00.11 /sbin/dynamic_pager -F /private/var/vm/swapfile root 41 0.0 0.1 2510044 5188 ?? Ss 14Oct11 1:52.84 /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/CarbonCore.framework/Versions/A/Support/fseventsd root 40 0.0 0.0 2485172 1868 ?? Ss 14Oct11 31:20.65 /usr/libexec/hidd root 38 0.0 0.0 2486364 984 ?? Ss 14Oct11 0:09.28 /usr/sbin/KernelEventAgent will 37 0.0 0.1 2850012 9908 ?? Ss 14Oct11 2:12.81 /System/Library/CoreServices/loginwindow.app/Contents/MacOS/loginwindow console root 36 0.0 2.1 2921032 173580 ?? Ss 14Oct11 21:49.53 /System/Library/Frameworks/CoreServices.framework/Frameworks/Metadata.framework/Support/mds root 34 0.0 0.0 2444888 688 ?? Ss 14Oct11 0:00.01 /System/Library/CoreServices/RemoteManagement/AppleVNCServer.bundle/Contents/Support/RFBRegisterMDNS root 30 0.0 0.0 2466304 752 ?? Ss 14Oct11 0:04.35 /sbin/SystemStarter _usbmuxd 29 0.0 0.0 2474744 1232 ?? Ss 14Oct11 0:35.67 /System/Library/PrivateFrameworks/MobileDevice.framework/Versions/A/Resources/usbmuxd -launchd root 26 0.0 0.0 2435292 852 ?? Ss 14Oct11 1:00.91 /usr/sbin/ntpd -c /private/etc/ntp-restrict.conf -n -g -p /var/run/ntpd.pid -f /var/db/ntp.drift root 24 0.0 0.5 2566212 45940 ?? Ss 14Oct11 1:19.55 /System/Library/CoreServices/coreservicesd root 22 0.0 0.1 2515260 4688 ?? Ss 14Oct11 0:08.01 /usr/sbin/securityd -i _mdnsresponder 18 0.0 0.0 2516888 3036 ?? Ss 14Oct11 0:46.69 /usr/sbin/mDNSResponder -launchd daemon 17 0.0 0.0 2508260 2776 ?? Ss 14Oct11 0:37.59 /usr/sbin/distnoted root 16 0.0 0.0 2522832 3256 ?? Ss 14Oct11 0:22.75 /usr/sbin/blued root 15 0.0 0.0 2512552 924 ?? Ss 14Oct11 0:07.14 /usr/sbin/syslogd root 14 0.0 0.0 2526000 4100 ?? Ss 14Oct11 1:37.81 /usr/libexec/configd root 13 0.0 0.0 2508408 1924 ?? Ss 14Oct11 0:05.98 /usr/sbin/diskarbitrationd root 12 0.0 0.0 2467152 624 ?? Ss 14Oct11 0:11.27 /usr/sbin/notifyd root 11 0.0 0.1 2517180 7468 ?? Rs 14Oct11 1:43.04 /usr/sbin/DirectoryService root 10 0.0 0.2 2514496 12784 ?? Ss 14Oct11 0:20.96 /usr/libexec/kextd root 1 0.0 0.0 2512136 1496 ?? Ss 14Oct11 30:24.66 /sbin/launchd root 74715 0.0 0.0 2434868 564 s001 R+ 8:57am 0:00.00 ps auxw root 8431 0.0 0.0 0 0 ?? Z 19Oct11 0:00.00 (tee) will 74711 0.0 0.1 2446116 5236 ?? Ss 8:56am 0:00.01 postgres: omero omero 127.0.0.1(64478) idle will 74679 0.0 1.4 3733348 119016 ?? S 8:52am 0:03.71 /Users/will/Desktop/OMERO.clients-Beta4.3.3.mac/OMERO.insight.app/Contents/MacOS/JavaApplicationStub -psn_0_7604032 _spotlight 73883 0.0 0.1 2525764 6376 ?? SNs 9:58pm 0:00.30 /System/Library/Frameworks/CoreServices.framework/Frameworks/Metadata.framework/Versions/A/Support/mdworker MDSImporterWorker com.apple.Spotlight.ImporterWorke will 73815 0.0 0.1 2811012 9320 ?? S 9:35pm 0:01.84 /Applications/Preview.app/Contents/MacOS/Preview -psn_0_7558965 will 73780 0.0 0.1 2517296 5924 ?? S 9:32pm 0:00.26 icebox --Ice.Config=/Users/will/Desktop/OMERO/dist/var/master/servers/OMERO.IceStorm/config/config will 73779 0.0 0.1 2508896 4580 ?? S 9:32pm 0:00.72 glacier2router --Ice.Config=/Users/will/Desktop/OMERO/dist/var/master/servers/OMERO.Glacier2/config/config will 73776 0.0 0.1 2481960 12148 ?? S 9:32pm 0:01.29 python lib/python/fsServerFS.py --Ice.Config=/Users/will/Desktop/OMERO/dist/var/master/servers/FileServer/config/config will 73772 0.0 0.1 2526880 8416 ?? S 9:32pm 0:00.85 icegridnode --daemon --pidfile /Users/will/Desktop/OMERO/dist/var/master/master.pid --nochdir --Ice.Config=/Users/will/Desktop/OMERO/dist/etc/internal.cfg,/Use will 72441 0.0 0.0 2438800 3696 s004 S+ 10:40am 0:00.02 python will 72146 0.0 0.3 2836016 25680 ?? S 9:29am 0:01.07 /Applications/iCal.app/Contents/MacOS/iCal -psn_0_7362309 will 71056 0.0 1.3 3969772 109708 ?? S Wed03pm 0:30.53 /System/Library/PrivateFrameworks/WebKit2.framework/WebProcess.app/Contents/MacOS/WebProcess /System/Library/PrivateFrameworks/WebKit2.framework/WebKit2 -type will 71054 0.0 0.6 2903456 49332 ?? S Wed03pm 0:39.86 /Applications/Safari.app/Contents/MacOS/Safari -psn_0_7227108