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Task #7361 (closed)

Opened 8 years ago

Closed 6 years ago

Bug: Map orientation in OAV etc

Reported by: wmoore Owned by: wmoore
Priority: minor Milestone: 5.x
Component: Web Version: 4.4.9
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

Some maps have different origin or XYZ order.

E.g. http://emdb.openmicroscopy.org.uk/webemdb/entry/1581/
when viewed in OAV is distorted
http://emdb.openmicroscopy.org.uk/webclient/open_astex_viewer/image_8bit/2428/

This either needs to be fixed at import or at image_as_map conversion?

Change History (2)

comment:1 Changed 7 years ago by wmoore

  • Milestone changed from OMERO-Beta4.4 to OMERO-Beta4.4.1
  • Priority changed from major to minor

Won't have time for 4.4 - Need to review the size of voxels too. This has been removed from the .map header (as written by def image_as_map() since this was causing the volume to appear very small in OAV for some images.

comment:2 Changed 6 years ago by wmoore

  • Resolution set to wontfix
  • Status changed from new to closed
  • Version set to 4.4.9

No time to do this - not working on EMDB for now.

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