Context Navigation

← Previous Ticket
Next Ticket →

Warning: Can't synchronize with repository "(default)" (/home/git/ome.git does not appear to be a Git repository.). Look in the Trac log for more information.

Notice: In order to edit this ticket you need to be either: a Product Owner, The owner or the reporter of the ticket, or, in case of a Task not yet assigned, a team_member"

Task #7728 (closed)

Opened 12 years ago

Closed 12 years ago

BUG:Submit files.

Reported by:	omero-qa	Owned by:	jburel
Priority:	minor	Milestone:	OMERO-4.4
Component:	from QA	Version:	n.a.
Keywords:	n.a.	Cc:	julio.mateos-langerak@…
Resources:	n.a.	Referenced By:	n.a.
References:	n.a.	Remaining Time:	n.a.
Sprint:	2012-02-14 (8)

Description

http://qa.openmicroscopy.org.uk/qa/feedback/4108/

Comment: Uploading to files. Failure happens in first file. After that, second file seems to contunue uploading (wheel turning) but shows text in red and the "failed" button

java.lang.NullPointerException
	at ome.formats.OMEROMetadataStoreClient.getSourceObject(OMEROMetadataStoreClient.java:1386)
	at ome.formats.OMEROMetadataStoreClient.getPlane(OMEROMetadataStoreClient.java:6209)
	at ome.formats.OMEROMetadataStoreClient.setPlaneTheZ(OMEROMetadataStoreClient.java:6303)
	at loci.formats.meta.FilterMetadata.setPlaneTheZ(FilterMetadata.java:2408)
	at loci.formats.MetadataTools.populatePixels(MetadataTools.java:147)
	at loci.formats.MetadataTools.populatePixels(MetadataTools.java:96)
	at loci.formats.in.DeltavisionReader.initPixels(DeltavisionReader.java:479)
	at loci.formats.in.DeltavisionReader.initFile(DeltavisionReader.java:242)
	at loci.formats.FormatReader.setId(FormatReader.java:1072)
	at loci.formats.ImageReader.setId(ImageReader.java:677)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:488)
	at loci.formats.ChannelFiller.setId(ChannelFiller.java:249)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:488)
	at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:257)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:488)
	at ome.formats.importer.ImportLibrary.open(ImportLibrary.java:312)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:488)
	at org.openmicroscopy.shoola.env.data.OMEROGateway.importImage(OMEROGateway.java:6402)
	at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.importFile(OmeroImageServiceImpl.java:1228)
	at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter.importFile(ImagesImporter.java:85)
	at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter.access$000(ImagesImporter.java:54)
	at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter$1.doCall(ImagesImporter.java:111)
	at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
	at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
	at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
	at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
	at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:274)
	at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
	at java.lang.Thread.run(Thread.java:680)

References

Referenced by:
← User Story (#7892): sprint8-insight-backlog

Change History (1)

comment:1 Changed 12 years ago by jburel

Milestone changed from Unscheduled to OMERO-Beta4.4
Resolution set to fixed
Sprint set to 2012-02-14 (8)
Status changed from new to closed

The error handling has been improved already and such scenario is now covered.Closing

Note: See TracTickets for help on using tickets. You may also have a look at Agilo extensions to the ticket.

Download in other formats: