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Task #8586 (closed)

Opened 12 years ago

Closed 12 years ago

BUG:Feedback 4290. Import tests

Reported by:	omero-qa	Owned by:	mlinkert
Priority:	minor	Milestone:	Unscheduled
Component:	from QA	Version:	n.a.
Keywords:	n.a.	Cc:	rkferguson@…
Resources:	n.a.	Referenced By:	n.a.
References:	n.a.	Remaining Time:	n.a.
Sprint:	n.a.

Description

http://qa.openmicroscopy.org.uk/qa/feedback/4290/

Comment: Failed:
bd-pathway/bram/42_6_1_100208_BJWT_LOPAC_05_08_10nM_R1/2010-02-19_000/Experiment.exp
li-flim/jean-marie/Flimdata/D Reference fluorescein4ns-CFPbpFILTER-multifreq.fli

Missing Library:
bd-pathway/darren/2009-05-01_001/Experiment.exp

Cannot create thumbnail:
li-flim/samples/lifetime-extended.fli
li-flim/jean-marie/Flimdata/lif_D Sample CFPYFP-cells-CFPbpFILTER-multifreq.fli

java.io.EOFException: Unexpected end of ZLIB input stream
	at java.util.zip.InflaterInputStream.fill(InflaterInputStream.java:223)
	at java.util.zip.InflaterInputStream.read(InflaterInputStream.java:141)
	at java.util.zip.GZIPInputStream.read(GZIPInputStream.java:90)
	at java.io.DataInputStream.readFully(DataInputStream.java:178)
	at java.io.DataInputStream.readFully(DataInputStream.java:152)
	at loci.formats.in.LiFlimReader.openBytes(LiFlimReader.java:173)
	at loci.formats.ImageReader.openBytes(ImageReader.java:401)
	at loci.formats.ChannelFiller.openBytes(ChannelFiller.java:183)
	at loci.formats.ChannelSeparator.openBytes(ChannelSeparator.java:209)
	at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:304)
	at loci.formats.MinMaxCalculator.openBytes(MinMaxCalculator.java:260)
	at ome.formats.importer.ImportLibrary.writeDataTileBased(ImportLibrary.java:871)
	at ome.formats.importer.ImportLibrary.importData(ImportLibrary.java:796)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:573)
	at org.openmicroscopy.shoola.env.data.OMEROGateway.importImage(OMEROGateway.java:6253)
	at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.importFile(OmeroImageServiceImpl.java:1247)
	at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter.importFile(ImagesImporter.java:86)
	at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter.access$000(ImagesImporter.java:55)
	at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter$1.doCall(ImagesImporter.java:113)
	at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
	at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
	at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
	at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
	at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276)
	at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
	at java.lang.Thread.run(Thread.java:680)

References

Change History (1)

comment:1 Changed 12 years ago by mlinkert

Resolution set to fixed
Status changed from new to closed

Fairly certain this has been fixed; at least, I cannot duplicate it.

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