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Task #8587 (closed)

Opened 12 years ago

Closed 12 years ago

BUG:Feedback 4289. Second failure

Reported by:	omero-qa	Owned by:	jburel
Priority:	critical	Milestone:	OMERO-4.4
Component:	Insight	Version:	n.a.
Keywords:	n.a.	Cc:	rkferguson@…
Resources:	n.a.	Referenced By:	n.a.
References:	n.a.	Remaining Time:	n.a.
Sprint:	n.a.

Description

http://qa.openmicroscopy.org.uk/qa/feedback/4289/

Comment: Failed:
bd-pathway/bram/42_6_1_100208_BJWT_LOPAC_05_08_10nM_R1/2010-02-19_000/Experiment.exp
li-flim/jean-marie/Flimdata/D Reference fluorescein4ns-CFPbpFILTER-multifreq.fli

Missing Library:
bd-pathway/darren/2009-05-01_001/Experiment.exp

Cannot create thumbnail:
li-flim/samples/lifetime-extended.fli
li-flim/jean-marie/Flimdata/lif_D Sample CFPYFP-cells-CFPbpFILTER-multifreq.fli

java.lang.NullPointerException
	at ome.formats.OMEROMetadataStoreClient.preparePixelsStore(OMEROMetadataStoreClient.java:2456)
	at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:558)
	at org.openmicroscopy.shoola.env.data.OMEROGateway.importImage(OMEROGateway.java:6253)
	at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.importFile(OmeroImageServiceImpl.java:1210)
	at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter.importFile(ImagesImporter.java:86)
	at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter.access$000(ImagesImporter.java:55)
	at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter$1.doCall(ImagesImporter.java:113)
	at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
	at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
	at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
	at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
	at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276)
	at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
	at java.lang.Thread.run(Thread.java:680)

References

Change History (8)

comment:1 Changed 12 years ago by jburel

Component changed from from QA to Insight
Milestone changed from Unscheduled to OMERO-Beta4.4
Priority changed from minor to critical

comment:2 Changed 12 years ago by jburel

li-flim/jean-marie/Flimdata/D Reference fluorescein4ns-CFPbpFILTER-multifreq.fli B-F ticket created see #9066
li-flim/jean-marie/Flimdata/lif_D Sample CFPYFP-cells-CFPbpFILTER-multifreq.fli. Floating precision. No support in RE #8337
li-flim/samples/lifetime-extended.fli Floating precision. No support in RE #8337

Last edited 12 years ago by jburel (previous) (diff)

comment:3 Changed 12 years ago by jburel

Re-import the following:

mias/frans/MIAS 3 D set 2 july 13 2009/
mias/frans/MIAS 3D set 3 july 13 2009/
mias/frans/NEO-Exp13072008-long-protokol/
mias/frans/One MNU Plate/
mias/frans/One Plate/
mias/frans/siRNA_PRIM1_03102008/

comment:4 Changed 12 years ago by jburel

retested:

Missing Library: bd-pathway/darren/2009-05-01_001/Experiment.exp TODO: improve the message. see #9076

Last edited 12 years ago by jburel (previous) (diff)

comment:5 Changed 12 years ago by jburel

bd-pathway/bram/42_6_1_100208_BJWT_LOPAC_05_08_10nM_R1/2010-02-19_000/Experiment.exp failed to import see #9077

comment:6 Changed 12 years ago by jburel

mias/frans/siRNA_PRIM1_03102008/ import OK
mias/frans/One Plate/ out of memory, TODO: increase memory
mias/frans/One MNU Plate/ import see #9082

Last edited 12 years ago by jburel (previous) (diff)

comment:7 Changed 12 years ago by jburel

mias/frans/MIAS 3 D set 2 july 13 2009/ import OK
mias/frans/MIAS 3D set 3 july 13 2009/ import OK

comment:8 Changed 12 years ago by jburel

Resolution set to fixed
Status changed from new to closed

The files generating errors have been re-imported and tickets opened when required.

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