Notice: In order to edit this ticket you need to be either: a Product Owner, The owner or the reporter of the ticket, or, in case of a Task not yet assigned, a team_member"

Task #8726 (closed)

Opened 7 years ago

Closed 7 years ago

Bug: Exception in insight when clicking on image

Reported by: rleigh Owned by: jburel
Priority: major Milestone: OMERO-4.4
Component: Insight Version: n.a.
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description (last modified by jburel)

After importing IAGFP-Noc_Four_R3D.dv, and clicking on the image in the project browser tree, the following exception was raised:

java.lang.Exception: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. 
Cannot find annotations for class pojos.ImageData.
    at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:897)
    at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2715)
    at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:988)
    at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:688)
    at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$4.doCall(StructuredAnnotationLoader.java:162)
    at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
    at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
    at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
    at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
    at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276)
    at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
    at java.lang.Thread.run(Thread.java:680)
Caused by: omero.InternalException
    serverStackTrace = "ome.conditions.InternalException:  Wrapped Exception: (org.springframework.jdbc.UncategorizedSQLException):
                        Hibernate operation: could not execute query; uncategorized SQLException for SQL [select this_.id as id33_5_, this_.acquisitionDate as acquisit2_33_5_, this_.archived as archived33_5_, this_.description as descript4_33_5_, this_.creation_id as

This error was seen for a few images shortly after importing. However, the error went away a few minutes later.

Regards,
Roger

Change History (2)

comment:1 Changed 7 years ago by jburel

  • Description modified (diff)
  • Milestone changed from Unscheduled to OMERO-Beta4.4
  • Priority changed from minor to major

comment:2 Changed 7 years ago by jburel

  • Resolution set to invalid
  • Status changed from new to closed

This looks like an issue with gretzky i.e. see SQL exception

Note: See TracTickets for help on using tickets. You may also have a look at Agilo extensions to the ticket.

1.3.13-PRO © 2008-2011 Agilo Software all rights reserved (this page was served in: 0.76959 sec.)

We're Hiring!