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Task #9118 (closed)

Opened 12 years ago

Closed 12 years ago

BUG:Zeiss LSM import failure

Reported by: ajpatterson Owned by: mlinkert
Priority: major Milestone: OMERO-4.4
Component: Bio-Formats Version: n.a.
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

File lsm-martin/080618.mdb failed, no error but looks wrong. Mostly grey noise with black region as bottom of image

Attachments (1)

lsm-in-zen2011.png (220.6 KB) - added by mlinkert-x 12 years ago.

Download all attachments as: .zip

Change History (4)

comment:1 Changed 12 years ago by rleigh

The original file (lsm_martin/01-02.lsm) is a two channel timeseries. However, this was imported as a single greyscale plane.

comment:2 Changed 12 years ago by rleigh

Sorry, the above image was incorrect. It's actually lsm_martin/405100percentsetting.lsm, and this is reproducible with showinf.

Changed 12 years ago by mlinkert-x

comment:3 Changed 12 years ago by mlinkert

  • Resolution set to invalid
  • Status changed from new to closed

It does look incorrect, but actually matches what is shown when opening lsm_martin/405100percentsetting.lsm in Zen 2011 (screenshot attached).

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