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Task #9145 (closed)

Opened 7 years ago

Closed 7 years ago

Last modified 7 years ago

Add requirements.txt to ease pip installation

Reported by: jamoore Owned by: sbesson
Priority: major Milestone: Future
Component: Deployment Version: n.a.
Keywords: n.a. Cc: wmoore
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

pip install -r requirements.txt should install all the known OMERO requirements:

  • numpy
  • scipy
  • pytables
  • icepy
  • ...

This would simplify, for example, the omero_homebrew.sh script.

Change History (4)

comment:1 Changed 7 years ago by sbesson

  • Cc sbesson removed
  • Milestone changed from Future to OMERO-Beta4.4
  • Owner set to sbesson

comment:2 Changed 7 years ago by sbesson

  • Milestone changed from OMERO-Beta4.4 to Future

Problems caused with some dependencies using pip install.
Tried to create a requirements.txt file with

numpy
scipy

and ran into issue https://github.com/pypa/pip/issues/25

Corresponding scipy issue (http://projects.scipy.org/scipy/ticket/1429) seems to indicate this will not be fixed. For now, we may have to rely on

pip install numpy
pip install scipy

comment:3 Changed 7 years ago by sbesson

  • Resolution set to invalid
  • Status changed from new to closed

comment:4 Changed 7 years ago by jmoore

@sbesson, do you not think it would be generally useful (even if scipy and/or numpy can't be included) to have the general python requirements in a single file for external developers?

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