Warning: Can't synchronize with repository "(default)" (/home/git/ome.git does not appear to be a Git repository.). Look in the Trac log for more information.
Notice: In order to edit this ticket you need to be either: a Product Owner, The owner or the reporter of the ticket, or, in case of a Task not yet assigned, a team_member"

Task #9208 (closed)

Opened 12 years ago

Closed 12 years ago

Bug: Insight viewer causes immediate crash reading large trestle image

Reported by: rleigh Owned by: jburel
Priority: critical Milestone: OMERO-4.4
Component: Insight Version: n.a.
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: 2012-07-03 (18)

Description

Image: (howe) user-5 read-annotate-1 Import/trestle/CMU-1.tif [Series 1]

2012-06-22 11:14:09,444 DEBUG [              omero.util.TempFileManager] ( Thread-18) Removing tree: /Users/rleigh/omero/tmp/omero_rleigh/3203@LS25531.local
2012-06-22 11:15:35,995 INFO  [opy.shoola.env.rnd.PixelsServicesFactory] (nitializer) Heap memory usage: max 530186240
2012-06-22 11:15:36,000 INFO  [enmicroscopy.shoola.env.init.TaskBarInit] (nitializer) Loaded L&F: com.apple.laf.AquaLookAndFeel
2012-06-22 11:15:42,745 INFO  [copy.shoola.env.data.DataServicesFactory] (nitializer) Server version: 4.4.0
Client version: 4.4.0-RC1-50-b78e1b3-ice33-b184
os_name: Mac OS X
os_arch: x86_64
java_version: 1.6.0_31
os_version: 10.6.8

2012-06-22 11:15:42,896 INFO  [y.shoola.env.data.login.LoginServiceImpl] (nitializer) Logged onto OMERO at: howe.openmicroscopy.org.uk
User Name: user-5 -- Password: ***

2012-06-22 11:16:17,890 FATAL [icroscopy.shoola.env.AbnormalExitHandler] (entQueue-0) Abnormal termination due to an uncaught exception.
java.lang.OutOfMemoryError: Java heap space
	at java.awt.image.DataBufferInt.<init>(DataBufferInt.java:41)
	at java.awt.image.Raster.createPackedRaster(Raster.java:458)
	at java.awt.image.DirectColorModel.createCompatibleWritableRaster(DirectColorModel.java:1015)
	at java.awt.image.BufferedImage.<init>(BufferedImage.java:315)
	at javax.media.opengl.GLJPanel$Updater.display(GLJPanel.java:1084)
	at com.sun.opengl.impl.GLDrawableHelper.display(GLDrawableHelper.java:78)
	at com.sun.opengl.impl.GLPbufferImpl$DisplayAction.run(GLPbufferImpl.java:222)
	at com.sun.opengl.impl.GLDrawableHelper.invokeGL(GLDrawableHelper.java:194)
	at com.sun.opengl.impl.GLPbufferImpl.maybeDoSingleThreadedWorkaround(GLPbufferImpl.java:208)
	at com.sun.opengl.impl.GLPbufferImpl.display(GLPbufferImpl.java:88)
	at javax.media.opengl.GLJPanel.paintComponent(GLJPanel.java:659)
	at javax.swing.JComponent.paint(JComponent.java:1029)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JLayeredPane.paint(JLayeredPane.java:567)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JViewport.paint(JViewport.java:795)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JSplitPane.paintChildren(JSplitPane.java:1030)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JLayeredPane.paint(JLayeredPane.java:567)
Abnormal termination due to an uncaught exception.
java.lang.OutOfMemoryError: Java heap space
	at java.awt.image.DataBufferInt.<init>(DataBufferInt.java:41)
	at java.awt.image.Raster.createPackedRaster(Raster.java:458)
	at java.awt.image.DirectColorModel.createCompatibleWritableRaster(DirectColorModel.java:1015)
	at java.awt.image.BufferedImage.<init>(BufferedImage.java:315)
	at javax.media.opengl.GLJPanel$Updater.display(GLJPanel.java:1084)
	at com.sun.opengl.impl.GLDrawableHelper.display(GLDrawableHelper.java:78)
	at com.sun.opengl.impl.GLPbufferImpl$DisplayAction.run(GLPbufferImpl.java:222)
	at com.sun.opengl.impl.GLDrawableHelper.invokeGL(GLDrawableHelper.java:194)
	at com.sun.opengl.impl.GLPbufferImpl.maybeDoSingleThreadedWorkaround(GLPbufferImpl.java:208)
	at com.sun.opengl.impl.GLPbufferImpl.display(GLPbufferImpl.java:88)
	at javax.media.opengl.GLJPanel.paintComponent(GLJPanel.java:659)
	at javax.swing.JComponent.paint(JComponent.java:1029)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JLayeredPane.paint(JLayeredPane.java:567)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JViewport.paint(JViewport.java:795)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JSplitPane.paintChildren(JSplitPane.java:1030)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JComponent.paintChildren(JComponent.java:862)
	at javax.swing.JComponent.paint(JComponent.java:1038)
	at javax.swing.JLayeredPane.paint(JLayeredPane.java:567)
Exception in thread "AWT-EventQueue-0"

Change History (1)

comment:1 Changed 12 years ago by jburel

  • Resolution set to fixed
  • Sprint set to 2012-07-03 (18)
  • Status changed from new to closed

Related to #9123. Now the compression level is always set to at least Medium for big images.

Note: See TracTickets for help on using tickets. You may also have a look at Agilo extensions to the ticket.

1.3.13-PRO © 2008-2011 Agilo Software all rights reserved (this page was served in: 0.66603 sec.)

© 2000-2014 University of Dundee & Open Microscopy Environment. Creative Commons Attribution 3.0 Unported License
OME source code is available under the GNU General public license or through commercial license from Glencoe Software

We're Hiring!