Warning: Can't synchronize with repository "(default)" (/home/git/ome.git does not appear to be a Git repository.). Look in the Trac log for more information.
Notice: In order to edit this ticket you need to be either: a Product Owner, The owner or the reporter of the ticket, or, in case of a Task not yet assigned, a team_member"

Task #9376 (closed)

Opened 12 years ago

Closed 12 years ago

Bug: blank tiles returned for some cellSens datasets

Reported by: mlinkert Owned by: mlinkert
Priority: major Milestone: OMERO-4.4.4
Component: Bio-Formats Version: n.a.
Keywords: n.a. Cc: olivier.burri@…
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

See cellsens/olivier/7262 wt col.vsi. Tiles chosen outside of ~85,000x40,000 appear all black.

Change History (2)

comment:1 Changed 12 years ago by mlinkert

Note too that the size of the image is incorrectly reported; it should be roughly 85000x40000, but is in fact reported as 338792 X 157848.

comment:2 Changed 12 years ago by mlinkert

  • Resolution set to fixed
  • Status changed from new to closed

Fixed with: https://github.com/melissalinkert/bioformats/commit/12f0325daeb267de1bfc5cd5e246ee21b0c401bb

The image dimensions now match what is shown in cellSens Viewer, and there are no extra black tiles.

Note that new builds are not yet available.

Note: See TracTickets for help on using tickets. You may also have a look at Agilo extensions to the ticket.

1.3.13-PRO © 2008-2011 Agilo Software all rights reserved (this page was served in: 0.66392 sec.)

We're Hiring!