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Task #9464 (closed)

Opened 7 years ago

Closed 7 years ago

Last modified 7 years ago

BUG:Editor nano-xml

Reported by: omero-qa Owned by: jburel
Priority: major Milestone: OMERO-4.4.4
Component: Insight Version: n.a.
Keywords: n.a. Cc: Anitha.Kannan@…, ux@…, jburel
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: 0.0d
Sprint: 2012-09-25 (5)

Description

​http://qa.openmicroscopy.org.uk/qa/feedback/4576/

Comment: Testing the OMERO.editor functionality.

java.lang.Exception: Abnormal termination due to an uncaught exception.
java.lang.NoSuchMethodError: net.n3.nanoxml.IXMLElement.getChildren()Ljava/util/ArrayList;
	at org.openmicroscopy.shoola.agents.editor.model.CPEimport.createTreeModel(CPEimport.java:707)
	at org.openmicroscopy.shoola.agents.editor.model.TreeModelFactory.getTree(TreeModelFactory.java:101)
	at org.openmicroscopy.shoola.agents.editor.view.EditorModel.setFileToEdit(EditorModel.java:365)
	at org.openmicroscopy.shoola.agents.editor.view.EditorComponent.setFileToEdit(EditorComponent.java:300)
	at org.openmicroscopy.shoola.agents.editor.EditorAgent.openLocalFile(EditorAgent.java:201)
	at org.openmicroscopy.shoola.agents.editor.view.EditorComponent.openLocalFile(EditorComponent.java:327)
	at org.openmicroscopy.shoola.agents.editor.uiComponents.UrlChooser.downloadUrl(UrlChooser.java:159)
	at org.openmicroscopy.shoola.agents.editor.uiComponents.UrlChooser.actionPerformed(UrlChooser.java:284)
	at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2028)
	at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2351)
	at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387)
	at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242)
	at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:236)
	at java.awt.Component.processMouseEvent(Component.java:6375)
	at javax.swing.JComponent.processMouseEvent(JComponent.java:3267)
	at java.awt.Component.processEvent(Component.java:6140)
	at java.awt.Container.processEvent(Container.java:2083)
	at java.awt.Component.dispatchEventImpl(Component.java:4737)
	at java.awt.Container.dispatchEventImpl(Container.java:2141)
	at java.awt.Component.dispatchEvent(Component.java:4565)
	at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4619)
	at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4280)
	at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4210)
	at java.awt.Container.dispatchEventImpl(Container.java:2127)
	at java.awt.Window.dispatchEventImpl(Window.java:2482)
	at java.awt.Component.dispatchEvent(Component.java:4565)
	at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:684)
	at java.awt.EventQueue.access$000(EventQueue.java:85)
	at java.awt.EventQueue$1.run(EventQueue.java:643)
	at java.awt.EventQueue$1.run(EventQueue.java:641)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87)
	at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:98)
	at java.awt.EventQueue$2.run(EventQueue.java:657)
	at java.awt.EventQueue$2.run(EventQueue.java:655)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87)
	at java.awt.EventQueue.dispatchEvent(EventQueue.java:654)
	at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296)
	at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211)
	at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188)
	at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Abnormal termination due to an uncaught exception.
java.lang.NoSuchMethodError: net.n3.nanoxml.IXMLElement.getChildren()Ljava/util/ArrayList;
	at org.openmicroscopy.shoola.agents.editor.model.CPEimport.createTreeModel(CPEimport.java:707)
	at org.openmicroscopy.shoola.agents.editor.model.TreeModelFactory.getTree(TreeModelFactory.java:101)
	at org.openmicroscopy.shoola.agents.editor.view.EditorModel.setFileToEdit(EditorModel.java:365)
	at org.openmicroscopy.shoola.agents.editor.view.EditorComponent.setFileToEdit(EditorComponent.java:300)
	at org.openmicroscopy.shoola.agents.editor.EditorAgent.openLocalFile(EditorAgent.java:201)
	at org.openmicroscopy.shoola.agents.editor.view.EditorComponent.openLocalFile(EditorComponent.java:327)
	at org.openmicroscopy.shoola.agents.editor.uiComponents.UrlChooser.downloadUrl(UrlChooser.java:159)
	at org.openmicroscopy.shoola.agents.editor.uiComponents.UrlChooser.actionPerformed(UrlChooser.java:284)
	at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2028)
	at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2351)
	at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387)
	at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242)
	at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:236)
	at java.awt.Component.processMouseEvent(Component.java:6375)
	at javax.swing.JComponent.processMouseEvent(JComponent.java:3267)
	at java.awt.Component.processEvent(Component.java:6140)
	at java.awt.Container.processEvent(Container.java:2083)
	at java.awt.Component.dispatchEventImpl(Component.java:4737)
	at java.awt.Container.dispatchEventImpl(Container.java:2141)
	at java.awt.Component.dispatchEvent(Component.java:4565)
	at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4619)
	at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4280)
	at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4210)
	at java.awt.Container.dispatchEventImpl(Container.java:2127)
	at java.awt.Window.dispatchEventImpl(Window.java:2482)
	at java.awt.Component.dispatchEvent(Component.java:4565)
	at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:684)
	at java.awt.EventQueue.access$000(EventQueue.java:85)
	at java.awt.EventQueue$1.run(EventQueue.java:643)
	at java.awt.EventQueue$1.run(EventQueue.java:641)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87)
	at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:98)
	at java.awt.EventQueue$2.run(EventQueue.java:657)
	at java.awt.EventQueue$2.run(EventQueue.java:655)
	at java.security.AccessController.doPrivileged(Native Method)
	at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87)
	at java.awt.EventQueue.dispatchEvent(EventQueue.java:654)
	at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296)
	at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211)
	at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188)
	at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Exception in thread "AWT-EventQueue-0"

	at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.showErrorDialog(UserNotifierImpl.java:189)
	at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.notifyError(UserNotifierImpl.java:287)
	at org.openmicroscopy.shoola.env.AbnormalExitHandler.doTermination(AbnormalExitHandler.java:146)
	at org.openmicroscopy.shoola.env.AbnormalExitHandler.terminate(AbnormalExitHandler.java:84)
	at org.openmicroscopy.shoola.env.AWTExceptionHanlder.handle(AWTExceptionHanlder.java:99)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at java.awt.EventDispatchThread.handleException(EventDispatchThread.java:412)
	at java.awt.EventDispatchThread.processException(EventDispatchThread.java:318)
	at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:312)
	at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211)
	at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196)
	at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188)
	at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)

Change History (6)

comment:1 Changed 7 years ago by jburel

  • Cc ux@… added
  • Component changed from from QA to Insight
  • Milestone changed from Unscheduled to OMERO-4.4.2
  • Priority changed from minor to major

comment:2 Changed 7 years ago by jmoore

Jean-Marie, with Will away, do you want to pass this to someone else or push to 4.5.0?

comment:3 Changed 7 years ago by jburel

  • Cc jburel added
  • Owner changed from wmoore to jburel

I will check the ordering of the jars.

comment:4 Changed 7 years ago by jburel

  • Remaining Time set to 0
  • Resolution set to fixed
  • Sprint set to 2012-09-25 (5)
  • Status changed from new to closed

see ​https://github.com/openmicroscopy/openmicroscopy/pull/357

comment:5 Changed 7 years ago by jburel <j.burel@…>

(In [bddb51815538491291198389910fdcfc5dfe8980/ome.git] on branch develop) Add nano-xml at the end of jar list (see #9464)

Jhotdraw and ControlP5 (processing) both use nano-xml
version issue reported in the above ticket.

comment:6 Changed 7 years ago by jean-marie burel <j.burel@…>

(In [d01da0a0b49b9b8539447adc489860efce58eef3/ome.git] on branch develop) Merge pull request #357 from jburel/jar-order

Add nano-xml at the end of jar list (see #9464)

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