Notice: In order to edit this ticket you need to be either: a Product Owner, The owner or the reporter of the ticket, or, in case of a Task not yet assigned, a team_member"

Task #9516 (new)

Opened 7 years ago

Last modified 4 years ago

RFE: add support for SICM data

Reported by: mlinkert Owned by:
Priority: minor Milestone: Unscheduled
Component: Bio-Formats Version: 5.0.0
Keywords: new-format, external Cc: a.shevchuk@…
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

See files in sicm/andrew/.

Change History (2)

comment:1 Changed 6 years ago by mlinkert

  • Keywords new-format added
  • Version set to 5.0.0

comment:2 Changed 4 years ago by mlinkert

  • Keywords external added
  • Owner mlinkert deleted

The actual dataset is just the .img file in the above directory. The .bmp file can be used to validate the image, and the .pas file contains reference Pascal code, though I'm not 100% convinced that it's for the same .img format. It should be fairly straightforward to read the image itself (single plane, stored raw as far as I can see); the metadata may be a little trickier. It might be worth trying to open the file in http://gwyddion.net/ for additional validation, as ECS and IonScope? SICM are both listed as supported formats.

Note: See TracTickets for help on using tickets. You may also have a look at Agilo extensions to the ticket.

1.3.13-PRO © 2008-2011 Agilo Software all rights reserved (this page was served in: 0.107717 sec.)

We're Hiring!