Bug: IsGraphCritical throws for images in orphaned images

[jamoore]

See the attached log for what happens as user-1 when loading the orphaned images of group private-1. (These are possibly corrupt SVS resolutions)

[jmoore]

2012-09-24 20:10:28,261 ERROR [                           omero.gateway] (proc.26123) getThumbnail:6100 Traceback (most recent call last):
  File "/home/omero/slave/workspace/OMERO-merge-green/src/dist/lib/python/omero/gateway/__init__.py", line 6053, in getThumbnail
    tb = self._prepareTB()
  File "/home/omero/slave/workspace/OMERO-merge-green/src/dist/lib/python/omero/gateway/__init__.py", line 5952, in _prepareTB
    tb.setPixelsId(pid, self._conn.SERVICE_OPTS)
  File "/home/omero/slave/workspace/OMERO-merge-green/src/dist/lib/python/omero/gateway/__init__.py", line 3327, in __call__
    return self.handle_exception(e, *args, **kwargs)
  File "/home/omero/slave/workspace/OMERO-merge-green/src/dist/lib/python/omeroweb/webclient/webclient_gateway.py", line 1876, in handle_exception
    e, *args, **kwargs)
  File "/home/omero/slave/workspace/OMERO-merge-green/src/dist/lib/python/omero/gateway/__init__.py", line 3324, in __call__
    return self.f(*args, **kwargs)
  File "/home/omero/slave/workspace/OMERO-merge-green/src/dist/lib/python/omero_api_ThumbnailStore_ice.py", line 95, in setPixelsId
    return _M_omero.api.ThumbnailStore._op_setPixelsId.invoke(self, ((pixelsId, ), _ctx))
SecurityViolation: exception ::omero::SecurityViolation
{
    serverStackTrace = ome.conditions.SecurityViolation: isGraphCriticalCheck: not enough context
        at ome.security.basic.CurrentDetails.isGraphCritical(CurrentDetails.java:204)
        at ome.security.basic.BasicSecuritySystem.isGraphCritical(BasicSecuritySystem.java:301)
        at ome.services.ThumbnailCtx.isExtendedGraphCritical(ThumbnailCtx.java:614)
        at ome.services.ThumbnailCtx.loadAndPrepareRenderingSettings(ThumbnailCtx.java:239)
        at ome.services.ThumbnailCtx.loadAndPrepareRenderingSettings(ThumbnailCtx.java:176)
        at ome.services.ThumbnailBean.setPixelsId(ThumbnailBean.java:276)
        at sun.reflect.GeneratedMethodAccessor679.invoke(Unknown Source)
...
        at $Proxy88.setPixelsId(Unknown Source)
        at sun.reflect.GeneratedMethodAccessor689.invoke(Unknown Source)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
        at java.lang.reflect.Method.invoke(Method.java:597)
        at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179)
        at ome.services.throttling.Callback.run(Callback.java:56)
        at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
        at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150)
        at ome.services.blitz.impl.ThumbnailStoreI.setPixelsId_async(ThumbnailStoreI.java:142)
        at sun.reflect.GeneratedMethodAccessor688.invoke(Unknown Source)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
        at java.lang.reflect.Method.invoke(Method.java:597)
        at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
        at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
        at omero.cmd.CallContext.invoke(CallContext.java:59)
        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
        at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
        at $Proxy89.setPixelsId_async(Unknown Source)
        at omero.api._ThumbnailStoreTie.setPixelsId_async(_ThumbnailStoreTie.java:190)
        at omero.api._ThumbnailStoreDisp.___setPixelsId(_ThumbnailStoreDisp.java:232)
        at omero.api._ThumbnailStoreDisp.__dispatch(_ThumbnailStoreDisp.java:728)
        at IceInternal.Incoming.invoke(Incoming.java:159)
        at Ice.ConnectionI.invokeAll(ConnectionI.java:2037)
        at Ice.ConnectionI.message(ConnectionI.java:972)
        at IceInternal.ThreadPool.run(ThreadPool.java:577)
        at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
        at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)

    serverExceptionClass = ome.conditions.SecurityViolation
    message = isGraphCriticalCheck: not enough context
}

2012-09-24 20:10:30,010  INFO [                           omero.gateway] (proc.26124) connect:1735 created connection (uuid=683285e4-4764-4806-8917-fb2c72749b53)

[wmoore]

Sorry - I don't understand what corrupt SVS resolutions are or what isGraphCritical() is doing or whether this is really a web issue?

[jmoore]

What this means is that something went wrong with the import and so the renderings, etc. were no longer there. Closing as invalid, but if you see securityviolation with isgraphcritical then something similar is going on.