1 | [bpindelski@3141592 openmicroscopy (dev_4_4)]$ ./build.py -f components/tools/OmeroPy/build.xml test -DTEST=tablestest |
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2 | Buildfile: /usr/local/dev/openmicroscopy/components/tools/OmeroPy/build.xml |
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3 | Entering /usr/local/dev/openmicroscopy/components/tools/OmeroPy... |
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4 | |
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5 | python-test: |
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6 | Entering /usr/local/dev/openmicroscopy/components/tools/OmeroPy... |
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7 | |
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8 | python-test-single: |
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9 | WARNING: '' not a valid package name; please use only.-separated package names in setup.py |
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10 | running test |
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11 | running egg_info |
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12 | writing target/omero_client.egg-info/PKG-INFO |
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13 | writing top-level names to target/omero_client.egg-info/top_level.txt |
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14 | writing dependency_links to target/omero_client.egg-info/dependency_links.txt |
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15 | reading manifest file 'target/omero_client.egg-info/SOURCES.txt' |
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16 | writing manifest file 'target/omero_client.egg-info/SOURCES.txt' |
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17 | running build_ext |
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18 | testAllColumns_4_4_5 (tablestest.backwards_compatibility.BackwardsCompatibilityTest) ... ok |
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19 | testAddSingleRow (tablestest.hdfstorage.TestHdfStorage) ... ok |
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20 | testCreationWithMetadata (tablestest.hdfstorage.TestHdfStorage) ... ok |
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21 | testHandlesExistingDirectory (tablestest.hdfstorage.TestHdfStorage) ... ok |
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22 | testInitializationOnInitializedFileFails (tablestest.hdfstorage.TestHdfStorage) ... ok |
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23 | testInvalidFile (tablestest.hdfstorage.TestHdfStorage) ... ok |
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24 | testLocking (tablestest.hdfstorage.TestHdfStorage) ... ok |
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25 | testMaskColumn (tablestest.hdfstorage.TestHdfStorage) ... ok |
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26 | testModifyRow (tablestest.hdfstorage.TestHdfStorage) ... ok |
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27 | testReadTicket1951 (tablestest.hdfstorage.TestHdfStorage) ... ok |
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28 | testSimpleCreation (tablestest.hdfstorage.TestHdfStorage) ... ok |
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29 | testSorting (tablestest.hdfstorage.TestHdfStorage) ... ok |
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30 | testStringCol (tablestest.hdfstorage.TestHdfStorage) ... ok |
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31 | testValidFile (tablestest.hdfstorage.TestHdfStorage) ... ok |
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32 | testErrorInGet (tablestest.servants.TestTables) ... ERROR |
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33 | testErrorInStorage (tablestest.servants.TestTables) ... HDF5-DIAG: Error detected in HDF5 (1.8. thread 0: |
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34 | #000: H5F.c line 1522 in H5Fopen( unable to open file |
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35 | major: File accessability |
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36 | minor: Unable to open file |
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37 | #001: H5F.c line 1313 in H5F_open( unable to read superblock |
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38 | major: File accessability |
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39 | minor: Read failed |
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40 | #002: H5Fsuper.c line 334 in H5F_super_read( unable to find file signature |
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41 | major: File accessability |
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42 | minor: Not an HDF5 file |
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43 | #003: H5Fsuper.c line 155 in H5F_locate_signature( unable to find a valid file signature |
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44 | major: Low-level I/O |
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45 | minor: Unable to initialize object |
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46 | HDF5-DIAG: Error detected in HDF5 (1.8. thread 0: |
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47 | #000: H5F.c line 2589 in H5Fget_mdc_config( not a file ID |
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48 | major: Invalid arguments to routine |
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49 | minor: Bad value |
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50 | HDF5-DIAG: Error detected in HDF5 (1.8. thread 0: |
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51 | #000: H5F.c line 2628 in H5Fset_mdc_config( not a file ID |
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52 | major: Invalid arguments to routine |
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53 | minor: Bad value |
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54 | HDF5-DIAG: Error detected in HDF5 (1.8. thread 0: |
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55 | #000: H5Adeprec.c line 208 in H5Aopen_name( not a location |
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56 | major: Invalid arguments to routine |
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57 | minor: Inappropriate type |
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58 | #001: H5Gloc.c line 253 in H5G_loc( invalid object ID |
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59 | major: Invalid arguments to routine |
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60 | minor: Bad value |
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61 | HDF5-DIAG: Error detected in HDF5 (1.8. thread 0: |
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62 | #000: H5Gdeprec.c line 296 in H5Gopen1( not a location |
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63 | major: Invalid arguments to routine |
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64 | minor: Inappropriate type |
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65 | #001: H5Gloc.c line 253 in H5G_loc( invalid object ID |
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66 | major: Invalid arguments to routine |
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67 | minor: Bad value |
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68 | HDF5-DIAG: Error detected in HDF5 (1.8. thread 0: |
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69 | #000: H5G.c line 766 in H5Gclose( not a group |
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70 | major: Invalid arguments to routine |
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71 | minor: Inappropriate type |
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72 | Exception tables.exceptions.HDF5ExtError: HDF5ExtError('Problems closing the Group /',) in ignored |
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73 | ok |
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74 | testTableAddData (tablestest.servants.TestTables) ... ERROR |
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75 | testTableIncrDecr (tablestest.servants.TestTables) ... ERROR |
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76 | testTableModifications (tablestest.servants.TestTables) ... ERROR |
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77 | testTablePreInitialized (tablestest.servants.TestTables) ... ERROR |
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78 | testTableSearch (tablestest.servants.TestTables) ... ERROR |
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79 | testTables (tablestest.servants.TestTables) ... ERROR |
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80 | testTablesIGetDirGetsRepoGetsSFCantFindRepoFile (tablestest.servants.TestTables) ... ok |
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81 | testTablesIGetDirGetsRepoGetsSFCantFindRepoObject (tablestest.servants.TestTables) ... ok |
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82 | testTablesIGetDirGetsRepoGetsSFGetsRepo (tablestest.servants.TestTables) ... ok |
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83 | testTablesIGetDirGetsRepoThenNoSF (tablestest.servants.TestTables) ... ok |
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84 | testTablesIGetDirNoRepoCreated (tablestest.servants.TestTables) ... ok |
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85 | testTablesIGetDirNoRepoSet (tablestest.servants.TestTables) ... ok |
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86 | test10049openTableUnreadable (tablestest.service.TestTables) ... ok |
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87 | test2098 (tablestest.service.TestTables) ... ERROR |
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88 | test2855MetadataMethods (tablestest.service.TestTables) ... ERROR |
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89 | test2910 (tablestest.service.TestTables) ... ERROR |
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90 | test3714GetWhereListVars (tablestest.service.TestTables) ... ERROR |
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91 | test4000TableRead (tablestest.service.TestTables) ... ERROR |
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92 | testAllColumnsSameTable (tablestest.service.TestTables) ... ERROR |
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93 | testArrayColumn (tablestest.service.TestTables) ... ok |
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94 | testArrayColumnSize1 (tablestest.service.TestTables) ... ok |
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95 | testBlankTable (tablestest.service.TestTables) ... ERROR |
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96 | testCallContext (tablestest.service.TestTables) ... ok |
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97 | testDelete (tablestest.service.TestTables) ... ok |
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98 | testMask (tablestest.service.TestTables) ... ERROR |
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99 | testTicket2175 (tablestest.service.TestTables) ... ok |
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100 | testUpdate (tablestest.service.TestTables) ... ERROR |
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101 | ====================================================================== |
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102 | ERROR: testErrorInGet (tablestest.servants.TestTables) |
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103 | ---------------------------------------------------------------------- |
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104 | Traceback (most recent call last): |
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105 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/servants.py", line 318, in testErrorInGet |
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106 | table = tables.getTable(f, self.sf, self.current).table # From mock |
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107 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 71, in exc_handler |
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108 | raise omero.InternalException(msg, None, "Internal exception") |
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109 | InternalException: exception ::omero::InternalException |
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110 | { |
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111 | serverStackTrace = Traceback (most recent call last): |
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112 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 61, in exc_handler |
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113 | rv = func(*args, **kwargs) |
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114 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 28, in handler |
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115 | return func(*args, **kwargs) |
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116 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 858, in getTable |
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117 | call_context=current.ctx) |
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118 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 505, in __init__ |
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119 | self.can_write = factory.getAdminService().canUpdate(file_obj, call_context) |
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120 | TypeError: canUpdate() takes exactly 2 arguments (3 given) |
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121 | serverExceptionClass = None |
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122 | message = Internal exception |
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123 | } |
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124 | ====================================================================== |
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125 | ERROR: testTableAddData (tablestest.servants.TestTables) |
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126 | ---------------------------------------------------------------------- |
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127 | Traceback (most recent call last): |
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128 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/servants.py", line 275, in testTableAddData |
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129 | mocktable = self.testTables(newfile) |
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130 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/servants.py", line 232, in testTables |
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131 | table = tables.getTable(f, self.sf, self.current) |
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132 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 71, in exc_handler |
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133 | raise omero.InternalException(msg, None, "Internal exception") |
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134 | InternalException: exception ::omero::InternalException |
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135 | { |
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136 | serverStackTrace = Traceback (most recent call last): |
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137 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 61, in exc_handler |
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138 | rv = func(*args, **kwargs) |
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139 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 28, in handler |
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140 | return func(*args, **kwargs) |
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141 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 858, in getTable |
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142 | call_context=current.ctx) |
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143 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 505, in __init__ |
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144 | self.can_write = factory.getAdminService().canUpdate(file_obj, call_context) |
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145 | TypeError: canUpdate() takes exactly 2 arguments (3 given) |
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146 | serverExceptionClass = None |
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147 | message = Internal exception |
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148 | } |
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149 | ====================================================================== |
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150 | ERROR: testTableIncrDecr (tablestest.servants.TestTables) |
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151 | ---------------------------------------------------------------------- |
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152 | Traceback (most recent call last): |
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153 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/servants.py", line 240, in testTableIncrDecr |
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154 | table = omero.tables.TableI(self.ctx, omero.model.OriginalFileI(1,None), self.sf, storage) |
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155 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 505, in __init__ |
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156 | self.can_write = factory.getAdminService().canUpdate(file_obj, call_context) |
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157 | TypeError: canUpdate() takes exactly 2 arguments (3 given) |
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158 | ====================================================================== |
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159 | ERROR: testTableModifications (tablestest.servants.TestTables) |
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160 | ---------------------------------------------------------------------- |
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161 | Traceback (most recent call last): |
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162 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/servants.py", line 265, in testTableModifications |
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163 | mocktable = self.testTables() |
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164 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/servants.py", line 232, in testTables |
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165 | table = tables.getTable(f, self.sf, self.current) |
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166 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 71, in exc_handler |
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167 | raise omero.InternalException(msg, None, "Internal exception") |
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168 | InternalException: exception ::omero::InternalException |
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169 | { |
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170 | serverStackTrace = Traceback (most recent call last): |
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171 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 61, in exc_handler |
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172 | rv = func(*args, **kwargs) |
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173 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 28, in handler |
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174 | return func(*args, **kwargs) |
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175 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 858, in getTable |
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176 | call_context=current.ctx) |
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177 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 505, in __init__ |
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178 | self.can_write = factory.getAdminService().canUpdate(file_obj, call_context) |
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179 | TypeError: canUpdate() takes exactly 2 arguments (3 given) |
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180 | serverExceptionClass = None |
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181 | message = Internal exception |
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182 | } |
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183 | ====================================================================== |
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184 | ERROR: testTablePreInitialized (tablestest.servants.TestTables) |
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185 | ---------------------------------------------------------------------- |
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186 | Traceback (most recent call last): |
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187 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/servants.py", line 246, in testTablePreInitialized |
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188 | mocktable = self.testTables() |
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189 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/servants.py", line 232, in testTables |
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190 | table = tables.getTable(f, self.sf, self.current) |
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191 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 71, in exc_handler |
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192 | raise omero.InternalException(msg, None, "Internal exception") |
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193 | InternalException: exception ::omero::InternalException |
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194 | { |
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195 | serverStackTrace = Traceback (most recent call last): |
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196 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 61, in exc_handler |
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197 | rv = func(*args, **kwargs) |
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198 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 28, in handler |
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199 | return func(*args, **kwargs) |
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200 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 858, in getTable |
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201 | call_context=current.ctx) |
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202 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 505, in __init__ |
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203 | self.can_write = factory.getAdminService().canUpdate(file_obj, call_context) |
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204 | TypeError: canUpdate() takes exactly 2 arguments (3 given) |
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205 | serverExceptionClass = None |
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206 | message = Internal exception |
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207 | } |
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208 | ====================================================================== |
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209 | ERROR: testTableSearch (tablestest.servants.TestTables) |
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210 | ---------------------------------------------------------------------- |
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211 | Traceback (most recent call last): |
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212 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/servants.py", line 290, in testTableSearch |
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213 | table = self.testTableAddData(True, False) |
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214 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/servants.py", line 275, in testTableAddData |
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215 | mocktable = self.testTables(newfile) |
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216 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/servants.py", line 232, in testTables |
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217 | table = tables.getTable(f, self.sf, self.current) |
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218 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 71, in exc_handler |
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219 | raise omero.InternalException(msg, None, "Internal exception") |
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220 | InternalException: exception ::omero::InternalException |
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221 | { |
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222 | serverStackTrace = Traceback (most recent call last): |
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223 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 61, in exc_handler |
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224 | rv = func(*args, **kwargs) |
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225 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 28, in handler |
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226 | return func(*args, **kwargs) |
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227 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 858, in getTable |
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228 | call_context=current.ctx) |
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229 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 505, in __init__ |
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230 | self.can_write = factory.getAdminService().canUpdate(file_obj, call_context) |
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231 | TypeError: canUpdate() takes exactly 2 arguments (3 given) |
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232 | serverExceptionClass = None |
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233 | message = Internal exception |
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234 | } |
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235 | ====================================================================== |
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236 | ERROR: testTables (tablestest.servants.TestTables) |
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237 | ---------------------------------------------------------------------- |
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238 | Traceback (most recent call last): |
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239 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/servants.py", line 232, in testTables |
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240 | table = tables.getTable(f, self.sf, self.current) |
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241 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 71, in exc_handler |
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242 | raise omero.InternalException(msg, None, "Internal exception") |
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243 | InternalException: exception ::omero::InternalException |
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244 | { |
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245 | serverStackTrace = Traceback (most recent call last): |
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246 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 61, in exc_handler |
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247 | rv = func(*args, **kwargs) |
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248 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/util/decorators.py", line 28, in handler |
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249 | return func(*args, **kwargs) |
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250 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 858, in getTable |
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251 | call_context=current.ctx) |
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252 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero/tables.py", line 505, in __init__ |
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253 | self.can_write = factory.getAdminService().canUpdate(file_obj, call_context) |
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254 | TypeError: canUpdate() takes exactly 2 arguments (3 given) |
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255 | serverExceptionClass = None |
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256 | message = Internal exception |
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257 | } |
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258 | ====================================================================== |
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259 | ERROR: test2098 (tablestest.service.TestTables) |
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260 | ---------------------------------------------------------------------- |
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261 | Traceback (most recent call last): |
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262 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/service.py", line 123, in test2098 |
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263 | table.initialize([lc]) |
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264 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero_Tables_ice.py", line 844, in initialize |
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265 | return _M_omero.grid.Table._op_initialize.invoke(self, ((cols, ), _ctx)) |
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266 | ValidationException: exception ::omero::ValidationException |
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267 | { |
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268 | serverStackTrace = |
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269 | serverExceptionClass = |
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270 | message = Already initialized. |
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271 | } |
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272 | ====================================================================== |
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273 | ERROR: test2855MetadataMethods (tablestest.service.TestTables) |
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274 | ---------------------------------------------------------------------- |
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275 | Traceback (most recent call last): |
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276 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/service.py", line 159, in test2855MetadataMethods |
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277 | table.initialize([lc]) |
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278 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero_Tables_ice.py", line 844, in initialize |
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279 | return _M_omero.grid.Table._op_initialize.invoke(self, ((cols, ), _ctx)) |
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280 | ValidationException: exception ::omero::ValidationException |
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281 | { |
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282 | serverStackTrace = |
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283 | serverExceptionClass = |
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284 | message = Already initialized. |
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285 | } |
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286 | ====================================================================== |
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287 | ERROR: test2910 (tablestest.service.TestTables) |
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288 | ---------------------------------------------------------------------- |
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289 | Traceback (most recent call last): |
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290 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/service.py", line 190, in test2910 |
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291 | table.initialize([lc]) |
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292 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero_Tables_ice.py", line 844, in initialize |
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293 | return _M_omero.grid.Table._op_initialize.invoke(self, ((cols, ), _ctx)) |
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294 | ValidationException: exception ::omero::ValidationException |
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295 | { |
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296 | serverStackTrace = |
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297 | serverExceptionClass = |
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298 | message = Already initialized. |
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299 | } |
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300 | ====================================================================== |
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301 | ERROR: test3714GetWhereListVars (tablestest.service.TestTables) |
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302 | ---------------------------------------------------------------------- |
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303 | Traceback (most recent call last): |
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304 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/service.py", line 228, in test3714GetWhereListVars |
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305 | table.initialize([lc]) |
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306 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero_Tables_ice.py", line 844, in initialize |
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307 | return _M_omero.grid.Table._op_initialize.invoke(self, ((cols, ), _ctx)) |
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308 | ValidationException: exception ::omero::ValidationException |
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309 | { |
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310 | serverStackTrace = |
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311 | serverExceptionClass = |
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312 | message = Already initialized. |
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313 | } |
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314 | ====================================================================== |
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315 | ERROR: test4000TableRead (tablestest.service.TestTables) |
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316 | ---------------------------------------------------------------------- |
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317 | Traceback (most recent call last): |
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318 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/service.py", line 242, in test4000TableRead |
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319 | table.initialize([lc]) |
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320 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero_Tables_ice.py", line 844, in initialize |
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321 | return _M_omero.grid.Table._op_initialize.invoke(self, ((cols, ), _ctx)) |
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322 | ValidationException: exception ::omero::ValidationException |
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323 | { |
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324 | serverStackTrace = |
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325 | serverExceptionClass = |
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326 | message = Already initialized. |
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327 | } |
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328 | ====================================================================== |
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329 | ERROR: testAllColumnsSameTable (tablestest.service.TestTables) |
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330 | ---------------------------------------------------------------------- |
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331 | Traceback (most recent call last): |
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332 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/service.py", line 377, in testAllColumnsSameTable |
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333 | table.initialize(cols) |
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334 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero_Tables_ice.py", line 844, in initialize |
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335 | return _M_omero.grid.Table._op_initialize.invoke(self, ((cols, ), _ctx)) |
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336 | ValidationException: exception ::omero::ValidationException |
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337 | { |
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338 | serverStackTrace = |
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339 | serverExceptionClass = |
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340 | message = Already initialized. |
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341 | } |
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342 | ====================================================================== |
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343 | ERROR: testBlankTable (tablestest.service.TestTables) |
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344 | ---------------------------------------------------------------------- |
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345 | Traceback (most recent call last): |
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346 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/service.py", line 71, in testBlankTable |
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347 | table.initialize(cols) |
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348 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero_Tables_ice.py", line 844, in initialize |
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349 | return _M_omero.grid.Table._op_initialize.invoke(self, ((cols, ), _ctx)) |
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350 | ValidationException: exception ::omero::ValidationException |
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351 | { |
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352 | serverStackTrace = |
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353 | serverExceptionClass = |
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354 | message = Already initialized. |
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355 | } |
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356 | ====================================================================== |
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357 | ERROR: testMask (tablestest.service.TestTables) |
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358 | ---------------------------------------------------------------------- |
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359 | Traceback (most recent call last): |
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360 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/service.py", line 102, in testMask |
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361 | table.initialize([mask]) |
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362 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero_Tables_ice.py", line 844, in initialize |
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363 | return _M_omero.grid.Table._op_initialize.invoke(self, ((cols, ), _ctx)) |
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364 | ValidationException: exception ::omero::ValidationException |
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365 | { |
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366 | serverStackTrace = |
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367 | serverExceptionClass = |
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368 | message = Already initialized. |
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369 | } |
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370 | ====================================================================== |
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371 | ERROR: testUpdate (tablestest.service.TestTables) |
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372 | ---------------------------------------------------------------------- |
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373 | Traceback (most recent call last): |
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374 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/service.py", line 78, in testUpdate |
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375 | ofile = self.testBlankTable() |
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376 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/test/tablestest/service.py", line 71, in testBlankTable |
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377 | table.initialize(cols) |
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378 | File "/usr/local/dev/openmicroscopy/components/tools/OmeroPy/target/omero_Tables_ice.py", line 844, in initialize |
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379 | return _M_omero.grid.Table._op_initialize.invoke(self, ((cols, ), _ctx)) |
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380 | ValidationException: exception ::omero::ValidationException |
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381 | { |
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382 | serverStackTrace = |
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383 | serverExceptionClass = |
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384 | message = Already initialized. |
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385 | } |
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386 | ---------------------------------------------------------------------- |
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387 | Ran 43 tests in 14.090s |
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388 | FAILED (errors=16) |
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389 | Uploaded OriginalFile: 19 |
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390 | 22 |
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391 | Closing remaining open files: /Users/bpindelski/omero/tmp/omero_bpindelski/4908/omerovLJ2gN.tmp/mock.h5... Error in atexit._run_exitfuncs: |
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392 | Traceback (most recent call last): |
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393 | File "/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/atexit.py", line 24, in _run_exitfuncs |
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394 | func(*targs, **kargs) |
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395 | File "/usr/local/src/tables/tables/file.py", line 2331, in close_open_files |
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396 | fileh.close() |
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397 | File "/usr/local/src/tables/tables/file.py", line 2135, in close |
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398 | self.root._f_close() |
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399 | AttributeError: 'File' object has no attribute 'root' |
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400 | Error in sys.exitfunc: |
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401 | Traceback (most recent call last): |
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402 | File "/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/atexit.py", line 24, in _run_exitfuncs |
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403 | func(*targs, **kargs) |
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404 | File "/usr/local/src/tables/tables/file.py", line 2331, in close_open_files |
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405 | fileh.close() |
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406 | File "/usr/local/src/tables/tables/file.py", line 2135, in close |
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407 | self.root._f_close() |
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408 | AttributeError: 'File' object has no attribute 'root' |
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409 | Result: 1 |
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410 | Entering /usr/local/dev/openmicroscopy/components/tools/OmeroPy... |
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411 | |
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412 | BUILD SUCCESSFUL |
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413 | Total time: 16 seconds |
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