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Ticket #7776: log.txt

File log.txt, 38.6 KB (added by jmoore, 12 years ago)

Related example from get_objects.py

Line 
1@(7a189d8...) /tmp/chris/components/tools/OmeroPy $ PYTHONPATH=$PYTHONPATH:build/lib:test python test/gatewaytest/get_objects.py
2..I<IIII/private/tmp/chris/components/tools/OmeroPy/build/lib/omero_ServerErrors_ice.py:35: DeprecationWarning: BaseException.message has been deprecated as of Python 2.6
3  self.message = message
4/private/tmp/chris/components/tools/OmeroPy/build/lib/omero_api_IQuery_ice.py:133: DeprecationWarning: BaseException.message has been deprecated as of Python 2.6
5  return _M_omero.api.IQuery._op_findByQuery.invoke(self, ((query, params), _ctx))
6/private/tmp/chris/components/tools/OmeroPy/build/lib/omero_ServerErrors_ice.py:395: DeprecationWarning: BaseException.message has been deprecated as of Python 2.6
7  return IcePy.stringifyException(self)
8WARNING:blitz_gateway:ApiUsageException on <class 'omero.gateway.OmeroGatewaySafeCallWrapper'> to <dfd1a3d3-d6c2-4544-a579-e171e49a472fomero.api.IQuery> findByQuery(('select obj from Annotation obj join fetch obj.details.owner as owner join fetch obj.details.group join fetch obj.details.creationEvent where obj.textValue=:textValue', object #0 (::omero::sys::Parameters)
9{
10    map =
11    {
12        key = textValue
13        value = object #1 (::omero::RString)
14        {
15            _val = FindThisTag
16        }
17    }
18    theFilter = <nil>
19    theOptions = <nil>
20}), {})
21Traceback (most recent call last):
22  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 2985, in __call__
23    return self.f(*args, **kwargs)
24  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero_api_IQuery_ice.py", line 133, in findByQuery
25    return _M_omero.api.IQuery._op_findByQuery.invoke(self, ((query, params), _ctx))
26ApiUsageException: exception ::omero::ApiUsageException
27{
28    serverStackTrace = ome.conditions.ApiUsageException: Query named:
29
30        select obj from Annotation obj join fetch obj.details.owner as owner join fetch obj.details.group join fetch obj.details.creationEvent where obj.textValue=:textValue
31
32has returned more than one Object
33findBy methods must return a single value.
34Please try findAllBy methods for queries which return Lists.
35        at ome.logic.QueryImpl.throwNonUnique(QueryImpl.java:376)
36        at ome.logic.QueryImpl.findByQuery(QueryImpl.java:368)
37        at sun.reflect.GeneratedMethodAccessor304.invoke(Unknown Source)
38        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
39        at java.lang.reflect.Method.invoke(Method.java:597)
40        at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
41        at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
42        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
43        at ome.security.basic.EventHandler.invoke(EventHandler.java:165)
44        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
45        at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:111)
46        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
47        at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108)
48        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
49        at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:231)
50        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
51        at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116)
52        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
53        at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
54        at $Proxy73.findByQuery(Unknown Source)
55        at sun.reflect.GeneratedMethodAccessor304.invoke(Unknown Source)
56        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
57        at java.lang.reflect.Method.invoke(Method.java:597)
58        at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
59        at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
60        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
61        at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:95)
62        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
63        at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
64        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
65        at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
66        at $Proxy73.findByQuery(Unknown Source)
67        at sun.reflect.GeneratedMethodAccessor463.invoke(Unknown Source)
68        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
69        at java.lang.reflect.Method.invoke(Method.java:597)
70        at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179)
71        at ome.services.throttling.Callback.run(Callback.java:56)
72        at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
73        at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:136)
74        at ome.services.blitz.impl.QueryI.findByQuery_async(QueryI.java:92)
75        at omero.api._IQueryTie.findByQuery_async(_IQueryTie.java:113)
76        at omero.api._IQueryDisp.___findByQuery(_IQueryDisp.java:342)
77        at omero.api._IQueryDisp.__dispatch(_IQueryDisp.java:508)
78        at IceInternal.Incoming.invoke(Incoming.java:159)
79        at Ice.ConnectionI.invokeAll(ConnectionI.java:2037)
80        at Ice.ConnectionI.message(ConnectionI.java:972)
81        at IceInternal.ThreadPool.run(ThreadPool.java:577)
82        at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
83        at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)
84
85    serverExceptionClass = ome.conditions.ApiUsageException
86    message = Query named:
87
88        select obj from Annotation obj join fetch obj.details.owner as owner join fetch obj.details.group join fetch obj.details.creationEvent where obj.textValue=:textValue
89
90has returned more than one Object
91findBy methods must return a single value.
92Please try findAllBy methods for queries which return Lists.
93}
94E..WARNING:blitz_gateway:ApiUsageException on <class 'omero.gateway.OmeroGatewaySafeCallWrapper'> to <2603779f-c247-4360-ab24-6806c825bf99omero.api.IQuery> findByQuery(('select obj from Annotation obj join fetch obj.details.owner as owner join fetch obj.details.group join fetch obj.details.creationEvent', object #0 (::omero::sys::Parameters)
95{
96    map =
97    {
98    }
99    theFilter = <nil>
100    theOptions = <nil>
101}), {})
102Traceback (most recent call last):
103  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 2985, in __call__
104    return self.f(*args, **kwargs)
105  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero_api_IQuery_ice.py", line 133, in findByQuery
106    return _M_omero.api.IQuery._op_findByQuery.invoke(self, ((query, params), _ctx))
107ApiUsageException: exception ::omero::ApiUsageException
108{
109    serverStackTrace = ome.conditions.ApiUsageException: Query named:
110
111        select obj from Annotation obj join fetch obj.details.owner as owner join fetch obj.details.group join fetch obj.details.creationEvent
112
113has returned more than one Object
114findBy methods must return a single value.
115Please try findAllBy methods for queries which return Lists.
116        at ome.logic.QueryImpl.throwNonUnique(QueryImpl.java:376)
117        at ome.logic.QueryImpl.findByQuery(QueryImpl.java:368)
118        at sun.reflect.GeneratedMethodAccessor304.invoke(Unknown Source)
119        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
120        at java.lang.reflect.Method.invoke(Method.java:597)
121        at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
122        at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
123        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
124        at ome.security.basic.EventHandler.invoke(EventHandler.java:165)
125        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
126        at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:111)
127        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
128        at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108)
129        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
130        at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:231)
131        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
132        at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116)
133        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
134        at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
135        at $Proxy73.findByQuery(Unknown Source)
136        at sun.reflect.GeneratedMethodAccessor304.invoke(Unknown Source)
137        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
138        at java.lang.reflect.Method.invoke(Method.java:597)
139        at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
140        at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
141        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
142        at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:95)
143        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
144        at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
145        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
146        at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
147        at $Proxy73.findByQuery(Unknown Source)
148        at sun.reflect.GeneratedMethodAccessor463.invoke(Unknown Source)
149        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
150        at java.lang.reflect.Method.invoke(Method.java:597)
151        at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179)
152        at ome.services.throttling.Callback.run(Callback.java:56)
153        at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
154        at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:136)
155        at ome.services.blitz.impl.QueryI.findByQuery_async(QueryI.java:92)
156        at omero.api._IQueryTie.findByQuery_async(_IQueryTie.java:113)
157        at omero.api._IQueryDisp.___findByQuery(_IQueryDisp.java:342)
158        at omero.api._IQueryDisp.__dispatch(_IQueryDisp.java:508)
159        at IceInternal.Incoming.invoke(Incoming.java:159)
160        at Ice.ConnectionI.invokeAll(ConnectionI.java:2037)
161        at Ice.ConnectionI.message(ConnectionI.java:972)
162        at IceInternal.ThreadPool.run(ThreadPool.java:577)
163        at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
164        at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)
165
166    serverExceptionClass = ome.conditions.ApiUsageException
167    message = Query named:
168
169        select obj from Annotation obj join fetch obj.details.owner as owner join fetch obj.details.group join fetch obj.details.creationEvent
170
171has returned more than one Object
172findBy methods must return a single value.
173Please try findAllBy methods for queries which return Lists.
174}
175.EWARNING:omero.client:Ignoring error in client.__del__:<class 'Ice.SocketException'>
176Traceback (most recent call last):
177  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 316, in __del__
178    self.closeSession()
179  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 749, in closeSession
180    self.getRouter(oldIc).destroySession()
181  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 113, in destroySession
182    return _M_Glacier2.Router._op_destroySession.invoke(self, ((), _ctx))
183SocketException: Ice.SocketException:
184Too many open files
185EWARNING:omero.client:Ignoring error in client.__del__:<class 'Ice.SocketException'>
186Traceback (most recent call last):
187  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 316, in __del__
188    self.closeSession()
189  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 749, in closeSession
190    self.getRouter(oldIc).destroySession()
191  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 113, in destroySession
192    return _M_Glacier2.Router._op_destroySession.invoke(self, ((), _ctx))
193SocketException: Ice.SocketException:
194Too many open files
195EWARNING:omero.client:Ignoring error in client.__del__:<class 'Ice.SocketException'>
196Traceback (most recent call last):
197  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 316, in __del__
198    self.closeSession()
199  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 749, in closeSession
200    self.getRouter(oldIc).destroySession()
201  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 113, in destroySession
202    return _M_Glacier2.Router._op_destroySession.invoke(self, ((), _ctx))
203SocketException: Ice.SocketException:
204Too many open files
205WARNING:omero.client:Ignoring error in client.__del__:<class 'Ice.SyscallException'>
206Traceback (most recent call last):
207  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 316, in __del__
208    self.closeSession()
209  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 749, in closeSession
210    self.getRouter(oldIc).destroySession()
211  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 113, in destroySession
212    return _M_Glacier2.Router._op_destroySession.invoke(self, ((), _ctx))
213SyscallException: Ice.SyscallException:
214Too many open files
215EWARNING:omero.client:Ignoring error in client.__del__:<class 'Ice.SyscallException'>
216Traceback (most recent call last):
217  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 316, in __del__
218    self.closeSession()
219  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 749, in closeSession
220    self.getRouter(oldIc).destroySession()
221  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 113, in destroySession
222    return _M_Glacier2.Router._op_destroySession.invoke(self, ((), _ctx))
223SyscallException: Ice.SyscallException:
224Too many open files
225WARNING:omero.client:Ignoring error in client.__del__:<class 'Ice.SyscallException'>
226Traceback (most recent call last):
227  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 316, in __del__
228    self.closeSession()
229  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 749, in closeSession
230    self.getRouter(oldIc).destroySession()
231  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 113, in destroySession
232    return _M_Glacier2.Router._op_destroySession.invoke(self, ((), _ctx))
233SyscallException: Ice.SyscallException:
234Too many open files
235EWARNING:omero.client:Ignoring error in client.__del__:<class 'Ice.SyscallException'>
236Traceback (most recent call last):
237  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 316, in __del__
238    self.closeSession()
239  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 749, in closeSession
240    self.getRouter(oldIc).destroySession()
241  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 113, in destroySession
242    return _M_Glacier2.Router._op_destroySession.invoke(self, ((), _ctx))
243SyscallException: Ice.SyscallException:
244Too many open files
245EE
246======================================================================
247ERROR: testFindAnnotation (__main__.FindObjectTest)
248----------------------------------------------------------------------
249Traceback (most recent call last):
250  File "test/gatewaytest/get_objects.py", line 146, in testFindAnnotation
251    find_tag = self.gateway.getObject("Annotation", attributes={"textValue":tag_value})
252  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 2291, in getObject
253    result = self.getQueryService().findByQuery(query, params)
254  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 2988, in __call__
255    return self.handle_exception(e, *args, **kwargs)
256  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 2985, in __call__
257    return self.f(*args, **kwargs)
258  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero_api_IQuery_ice.py", line 133, in findByQuery
259    return _M_omero.api.IQuery._op_findByQuery.invoke(self, ((query, params), _ctx))
260ApiUsageException: exception ::omero::ApiUsageException
261{
262    serverStackTrace = ome.conditions.ApiUsageException: Query named:
263
264        select obj from Annotation obj join fetch obj.details.owner as owner join fetch obj.details.group join fetch obj.details.creationEvent where obj.textValue=:textValue
265
266has returned more than one Object
267findBy methods must return a single value.
268Please try findAllBy methods for queries which return Lists.
269        at ome.logic.QueryImpl.throwNonUnique(QueryImpl.java:376)
270        at ome.logic.QueryImpl.findByQuery(QueryImpl.java:368)
271        at sun.reflect.GeneratedMethodAccessor304.invoke(Unknown Source)
272        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
273        at java.lang.reflect.Method.invoke(Method.java:597)
274        at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
275        at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
276        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
277        at ome.security.basic.EventHandler.invoke(EventHandler.java:165)
278        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
279        at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:111)
280        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
281        at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108)
282        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
283        at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:231)
284        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
285        at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116)
286        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
287        at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
288        at $Proxy73.findByQuery(Unknown Source)
289        at sun.reflect.GeneratedMethodAccessor304.invoke(Unknown Source)
290        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
291        at java.lang.reflect.Method.invoke(Method.java:597)
292        at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
293        at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
294        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
295        at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:95)
296        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
297        at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43)
298        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
299        at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
300        at $Proxy73.findByQuery(Unknown Source)
301        at sun.reflect.GeneratedMethodAccessor463.invoke(Unknown Source)
302        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
303        at java.lang.reflect.Method.invoke(Method.java:597)
304        at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179)
305        at ome.services.throttling.Callback.run(Callback.java:56)
306        at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
307        at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:136)
308        at ome.services.blitz.impl.QueryI.findByQuery_async(QueryI.java:92)
309        at omero.api._IQueryTie.findByQuery_async(_IQueryTie.java:113)
310        at omero.api._IQueryDisp.___findByQuery(_IQueryDisp.java:342)
311        at omero.api._IQueryDisp.__dispatch(_IQueryDisp.java:508)
312        at IceInternal.Incoming.invoke(Incoming.java:159)
313        at Ice.ConnectionI.invokeAll(ConnectionI.java:2037)
314        at Ice.ConnectionI.message(ConnectionI.java:972)
315        at IceInternal.ThreadPool.run(ThreadPool.java:577)
316        at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
317        at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)
318
319    serverExceptionClass = ome.conditions.ApiUsageException
320    message = Query named:
321
322        select obj from Annotation obj join fetch obj.details.owner as owner join fetch obj.details.group join fetch obj.details.creationEvent where obj.textValue=:textValue
323
324has returned more than one Object
325findBy methods must return a single value.
326Please try findAllBy methods for queries which return Lists.
327}
328
329======================================================================
330ERROR: testGetExperimenter (__main__.GetObjectTest)
331----------------------------------------------------------------------
332Traceback (most recent call last):
333  File "test/gatewaytest/get_objects.py", line 239, in setUp
334    super(GetObjectTest, self).setUp()
335  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 54, in setUp
336    self.prepTestDB()
337  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 126, in prepTestDB
338    dbhelpers.bootstrap()
339  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 394, in bootstrap
340    p = p.create()
341  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 203, in create
342    client = USERS[self.owner].login()
343  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 99, in login
344    if not client.connect():
345  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1564, in connect
346    self._createSession()
347  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1474, in _createSession
348    self.setSecure(self.secure)
349  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1447, in setSecure
350    self.c = self.c.createClient(secure=secure)
351  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 306, in createClient
352    nClient.joinSession(self.getSessionId())
353  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 410, in joinSession
354    return self.createSession(session, session)
355  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 464, in createSession
356    prx = self.getRouter(self.__ic).createSession(username, password, ctx)
357  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 107, in createSession
358    return _M_Glacier2.Router._op_createSession.invoke(self, ((userId, password), _ctx))
359SyscallException: Ice.SyscallException:
360Too many open files
361
362======================================================================
363ERROR: testGetImage (__main__.GetObjectTest)
364----------------------------------------------------------------------
365Traceback (most recent call last):
366  File "test/gatewaytest/get_objects.py", line 239, in setUp
367    super(GetObjectTest, self).setUp()
368  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 54, in setUp
369    self.prepTestDB()
370  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 126, in prepTestDB
371    dbhelpers.bootstrap()
372  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 389, in bootstrap
373    client = loginAsRoot()
374  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 41, in loginAsRoot
375    return login(ROOT)
376  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 45, in login
377    return alias.login()
378  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 99, in login
379    if not client.connect():
380  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1564, in connect
381    self._createSession()
382  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1474, in _createSession
383    self.setSecure(self.secure)
384  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1445, in setSecure
385    self.c = oldC.createClient(secure=secure)
386  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 306, in createClient
387    nClient.joinSession(self.getSessionId())
388  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 410, in joinSession
389    return self.createSession(session, session)
390  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 464, in createSession
391    prx = self.getRouter(self.__ic).createSession(username, password, ctx)
392  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 107, in createSession
393    return _M_Glacier2.Router._op_createSession.invoke(self, ((userId, password), _ctx))
394SyscallException: Ice.SyscallException:
395Too many open files
396
397======================================================================
398ERROR: testGetProject (__main__.GetObjectTest)
399----------------------------------------------------------------------
400Traceback (most recent call last):
401  File "test/gatewaytest/get_objects.py", line 239, in setUp
402    super(GetObjectTest, self).setUp()
403  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 54, in setUp
404    self.prepTestDB()
405  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 126, in prepTestDB
406    dbhelpers.bootstrap()
407  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 389, in bootstrap
408    client = loginAsRoot()
409  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 41, in loginAsRoot
410    return login(ROOT)
411  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 45, in login
412    return alias.login()
413  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 99, in login
414    if not client.connect():
415  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1564, in connect
416    self._createSession()
417  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1474, in _createSession
418    self.setSecure(self.secure)
419  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1445, in setSecure
420    self.c = oldC.createClient(secure=secure)
421  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 303, in createClient
422    nClient = omero.client(props)
423  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/__init__.py", line 28, in client
424    return omero.clients.BaseClient(*args, **kwargs)
425  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 131, in __init__
426    self._initData(id)
427  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 263, in _initData
428    self.__oa = self.__ic.createObjectAdapter("omero.ClientCallback")
429  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Ice.py", line 274, in createObjectAdapter
430    adapter = self._impl.createObjectAdapter(name)
431SocketException: Ice.SocketException:
432Too many open files
433
434======================================================================
435ERROR: testListExperimentersAndGroups (__main__.GetObjectTest)
436----------------------------------------------------------------------
437Traceback (most recent call last):
438  File "test/gatewaytest/get_objects.py", line 239, in setUp
439    super(GetObjectTest, self).setUp()
440  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 54, in setUp
441    self.prepTestDB()
442  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 126, in prepTestDB
443    dbhelpers.bootstrap()
444  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 389, in bootstrap
445    client = loginAsRoot()
446  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 41, in loginAsRoot
447    return login(ROOT)
448  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 45, in login
449    return alias.login()
450  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 99, in login
451    if not client.connect():
452  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1564, in connect
453    self._createSession()
454  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1464, in _createSession
455    self._ic_props[omero.constants.PASSWORD])
456  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 464, in createSession
457    prx = self.getRouter(self.__ic).createSession(username, password, ctx)
458  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 107, in createSession
459    return _M_Glacier2.Router._op_createSession.invoke(self, ((userId, password), _ctx))
460SyscallException: Ice.SyscallException:
461Too many open files
462
463======================================================================
464ERROR: testListProjects (__main__.GetObjectTest)
465----------------------------------------------------------------------
466Traceback (most recent call last):
467  File "test/gatewaytest/get_objects.py", line 239, in setUp
468    super(GetObjectTest, self).setUp()
469  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 54, in setUp
470    self.prepTestDB()
471  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 126, in prepTestDB
472    dbhelpers.bootstrap()
473  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 389, in bootstrap
474    client = loginAsRoot()
475  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 41, in loginAsRoot
476    return login(ROOT)
477  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 45, in login
478    return alias.login()
479  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 99, in login
480    if not client.connect():
481  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1564, in connect
482    self._createSession()
483  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1464, in _createSession
484    self._ic_props[omero.constants.PASSWORD])
485  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 464, in createSession
486    prx = self.getRouter(self.__ic).createSession(username, password, ctx)
487  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 107, in createSession
488    return _M_Glacier2.Router._op_createSession.invoke(self, ((userId, password), _ctx))
489SocketException: Ice.SocketException:
490Too many open files
491
492======================================================================
493ERROR: testSearchObjects (__main__.GetObjectTest)
494----------------------------------------------------------------------
495Traceback (most recent call last):
496  File "test/gatewaytest/get_objects.py", line 239, in setUp
497    super(GetObjectTest, self).setUp()
498  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 54, in setUp
499    self.prepTestDB()
500  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 126, in prepTestDB
501    dbhelpers.bootstrap()
502  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 389, in bootstrap
503    client = loginAsRoot()
504  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 40, in loginAsRoot
505    refreshConfig()
506  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/dbhelpers.py", line 31, in refreshConfig
507    bg = omero.gateway.BlitzGateway()
508  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1208, in __init__
509    self._resetOmeroClient()
510  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1499, in _resetOmeroClient
511    self.c = omero.client(pmap=['--Ice.Config='+','.join(self.ice_config)])
512  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/__init__.py", line 28, in client
513    return omero.clients.BaseClient(*args, **kwargs)
514  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 118, in __init__
515    id.properties = Ice.createProperties(args)
516  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Ice.py", line 524, in createProperties
517    properties = IcePy.createProperties(args, defaults)
518FileException: exception ::Ice::FileException
519{
520    error = 24
521    path = /Users/moore/ice.config
522}
523
524======================================================================
525ERROR: testTraversal (__main__.GetObjectTest)
526----------------------------------------------------------------------
527Traceback (most recent call last):
528  File "test/gatewaytest/get_objects.py", line 239, in setUp
529    super(GetObjectTest, self).setUp()
530  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 47, in setUp
531    self.doDisconnect()
532  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/scripts/testdb_create.py", line 69, in doDisconnect
533    self.gateway = omero.client_wrapper(group='system', try_super=True)
534  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/__init__.py", line 24, in client_wrapper
535    return omero.gateway.BlitzGateway(*args, **kwargs)
536  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1208, in __init__
537    self._resetOmeroClient()
538  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/gateway/__init__.py", line 1499, in _resetOmeroClient
539    self.c = omero.client(pmap=['--Ice.Config='+','.join(self.ice_config)])
540  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/__init__.py", line 28, in client
541    return omero.clients.BaseClient(*args, **kwargs)
542  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 118, in __init__
543    id.properties = Ice.createProperties(args)
544  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Ice.py", line 524, in createProperties
545    properties = IcePy.createProperties(args, defaults)
546FileException: exception ::Ice::FileException
547{
548    error = 24
549    path = /Users/moore/ice.config
550}
551
552----------------------------------------------------------------------
553Ran 13 tests in 116.833s
554
555FAILED (errors=8)
556WARNING:omero.client:Ignoring error in client.__del__:<class 'Ice.SyscallException'>
557Traceback (most recent call last):
558  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 316, in __del__
559    self.closeSession()
560  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 749, in closeSession
561    self.getRouter(oldIc).destroySession()
562  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 113, in destroySession
563    return _M_Glacier2.Router._op_destroySession.invoke(self, ((), _ctx))
564SyscallException: Ice.SyscallException:
565Too many open files
566WARNING:omero.client:Ignoring error in client.__del__:<class 'Ice.SyscallException'>
567Traceback (most recent call last):
568  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 316, in __del__
569    self.closeSession()
570  File "/private/tmp/chris/components/tools/OmeroPy/build/lib/omero/clients.py", line 749, in closeSession
571    self.getRouter(oldIc).destroySession()
572  File "/usr/local/Cellar/zeroc-ice33/3.3.1/python/Glacier2_Router_ice.py", line 113, in destroySession
573    return _M_Glacier2.Router._op_destroySession.invoke(self, ((), _ctx))
574SyscallException: Ice.SyscallException:
575Too many open files
576

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