Warning: Can't synchronize with repository "(default)" (/home/git/ome.git does not appear to be a Git repository.). Look in the Trac log for more information.
Notice: In order to edit this ticket you need to be either: a Product Owner, The owner or the reporter of the ticket, or, in case of a Task not yet assigned, a team_member"

Task #13194 (closed)

Opened 8 years ago

Closed 8 years ago

Bug: tiled tiff image constraint violation

Reported by: mtbcarroll Owned by: mlinkert
Priority: major Milestone: Unscheduled
Component: Bio-Formats Version: OMERO-5.2.0
Keywords: TiffReader, external Cc: bf@…, daniel.garneau@…
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

https://www.openmicroscopy.org/qa2/qa/feedback/17126/ reports an OMERO 5.2 import failure with 2 Go images (tiled tiff image) that violates positive_float_check on Pixels which suggests to me that a physical pixel size is being set that is <=0. I have requested an example problem image file. Of course, please reassign if this turns out to be an OMERO bug, and I am guessing that it is the TIFF reader that requires attention.

Change History (2)

comment:1 Changed 8 years ago by mlinkert

Looks like a file was never uploaded - do we need to follow up on the QA?

comment:2 Changed 8 years ago by mtbcarroll

  • Resolution set to invalid
  • Status changed from new to closed

It turns out that the image files wouldn't open with anything so were probably somehow corrupt in the first place.

Note: See TracTickets for help on using tickets. You may also have a look at Agilo extensions to the ticket.

1.3.13-PRO © 2008-2011 Agilo Software all rights reserved (this page was served in: 0.65764 sec.)

We're Hiring!