Bug #1539 (closed)
Opened 15 years ago
Closed 15 years ago
Feedback 147:re-importing exported img ignores ds
Reported by: | omero-qa | Owned by: | cxallan |
---|---|---|---|
Priority: | critical | Cc: | jason@… |
Sprint: | n.a. | ||
Total Remaining Time: | n.a. |
Description
http://qa.openmicroscopy.org.uk/qa/feedback/147/
Looks like images which are exported from OMERO fail to be linked to target datasets on re-import. My guess is that this is coming from the lsids which are used:
jmoore@necromancer /var/www/qa.openmicroscopy.org.uk/OMERO.qa/FileStore/147 $ tiffcomment TRE_5_BLOCK1_R3D_D3D.ome.tif | grep Image <Image DefaultPixels="urn:lsid:export.openmicroscopy.org:Pixels:ac83911a-ea58-4019-a143-cb82e7e85490_750:25683" ID="urn:lsid:export.openmicroscopy.org:Image:ac83911a-ea58-4019-a143-cb82e7e85490_750:25682" Name="Z:\jason\TRE\TRE_5_BLOCK1_R3D_D3D.dv">
For example, from test_good_images/ome-tiff, the only file which shows this behavior is "8x binning" which is also the only one with a differing lsid:
jmoore@necromancer /ome/data_repo/test_images_good/ome-tiff $ for i in *; do echo -n $i && tiffcomment "$i" | xmllint --format - | perl -pe 's/^.*<(Image.*)>.*$/$1/'; done | grep Image | grep ID Image ID="openmicroscopy.org:Image:1" Name="4D-series" DefaultPixels="openmicroscopy.org:Pixels:1-1" Image Name="8x binning int 125x50 286fps_1" ID="imperial.ac.uk/imagingfacility:Image:BM-MSPITALE8" Image ID="openmicroscopy.org:Image:1" Name="multi-channel-4D-series" DefaultPixels="openmicroscopy.org:Pixels:1-1" Image ID="openmicroscopy.org:Image:1" Name="multi-channel-time-series" DefaultPixels="openmicroscopy.org:Pixels:1-1" Image ID="openmicroscopy.org:Image:1" Name="multi-channel-z-series" DefaultPixels="openmicroscopy.org:Pixels:1-1" Image ID="openmicroscopy.org:Image:1" Name="multi-channel" DefaultPixels="openmicroscopy.org:Pixels:1-1" Image ID="openmicroscopy.org:Image:1" Name="single-channel" DefaultPixels="openmicroscopy.org:Pixels:1-1" Image ID="openmicroscopy.org:Image:1" Name="time-series" DefaultPixels="openmicroscopy.org:Pixels:1-1" Image ID="openmicroscopy.org:Image:1" Name="z-series" DefaultPixels="openmicroscopy.org:Pixels:1-1"
Change History (2)
comment:1 Changed 15 years ago by jmoore
- Milestone changed from Unscheduled to OMERO-Beta4.1
comment:2 Changed 15 years ago by cxallan
- Resolution set to fixed
- Status changed from new to closed
Fixed in r5375.