Task #6915 (closed)
Opened 13 years ago
Closed 13 years ago
BUG:Import MetaMorph
Reported by: | omero-qa | Owned by: | mlinkert |
---|---|---|---|
Priority: | minor | Milestone: | Unscheduled |
Component: | from QA | Version: | n.a. |
Keywords: | n.a. | Cc: | john.lim@… |
Resources: | n.a. | Referenced By: | n.a. |
References: | n.a. | Remaining Time: | n.a. |
Sprint: | n.a. |
Description
http://qa.openmicroscopy.org.uk/qa/feedback/4008/
Comment: Unable to import a MetaMorph? 7.7 multi-position .nd file
loci.formats.FormatException: Invalid image number: 1 (series=0, imageCount=1) at loci.formats.FormatTools.checkPlaneNumber(FormatTools.java:724) at loci.formats.FormatTools.checkPlaneParameters(FormatTools.java:713) at loci.formats.in.MinimalTiffReader.openBytes(MinimalTiffReader.java:251) at loci.formats.in.MetamorphReader.openBytes(MetamorphReader.java:221) at loci.formats.in.MetamorphReader.openBytes(MetamorphReader.java:236) at loci.formats.ImageReader.openBytes(ImageReader.java:394) at loci.formats.ChannelFiller.openBytes(ChannelFiller.java:183) at loci.formats.ChannelSeparator.openBytes(ChannelSeparator.java:209) at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:304) at loci.formats.MinMaxCalculator.openBytes(MinMaxCalculator.java:260) at ome.formats.importer.ImportLibrary.writeDataTileBased(ImportLibrary.java:786) at ome.formats.importer.ImportLibrary.importData(ImportLibrary.java:711) at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:488) at org.openmicroscopy.shoola.env.data.OMEROGateway.importImage(OMEROGateway.java:6314) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.importFile(OmeroImageServiceImpl.java:1175) at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter.importFile(ImagesImporter.java:85) at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter.access$000(ImagesImporter.java:54) at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter$1.doCall(ImagesImporter.java:111) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:274) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Unknown Source)
Change History (1)
comment:1 Changed 13 years ago by mlinkert
- Resolution set to fixed
- Status changed from new to closed
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This dataset opens correctly using the latest revision of bioformats.git:develop.