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Task #7709 (new)

Opened 12 years ago

Last modified 10 years ago

Re-evaluate strategy for assigning channel colors — at Initial Version

Reported by: mlinkert Owned by:
Priority: minor Milestone: Unscheduled
Component: General Version: n.a.
Keywords: n.a. Cc: jburel, wmoore, rleigh, cblackburn, dsudar@…
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

From https://trac.openmicroscopy.org.uk/ome/ticket/3651#comment:7:

Also need to review the color selection based on wavelength:

E.g. lei/joel/sequental scan 2/

  • Currently cut-off red->green is 560.
  • We have two channels with emission filters: 553-618 and 665-800
  • We pick wavelength as cut-in + 15 (ignore emission).
  • Both these channels are therefore colored Red.

Although the above example could be fixed by adjusting the "+15" > increment to cut-in or by moving the green->red boundary, this could > easily "break" another format / example.

Color selection algorithm could be improved to order channels by > wavelength - Preferentially color Blue -> Green -> Red, instead of > color 2 channels same color.

If it's not being done already, it would also be a good idea to do something with the Channel.Color attribute, as this is now populated for a handful of formats (see #3651).

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