1 | 2013-02-14 09:41:25,774 WARN [ ome.system.UpgradeCheck] (nitializer) UPGRADE AVAILABLE:Please upgrade to 4.4.6 See http://trac.openmicroscopy.org.uk/omero for the latest version |
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2 | 2013-02-14 09:41:25,856 INFO [opy.shoola.env.rnd.PixelsServicesFactory] (nitializer) Heap memory usage: max 1060372480 |
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3 | 2013-02-14 09:41:25,865 INFO [enmicroscopy.shoola.env.init.TaskBarInit] (nitializer) Loaded L&F: com.apple.laf.AquaLookAndFeel |
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4 | 2013-02-14 09:41:50,177 INFO [copy.shoola.env.data.DataServicesFactory] (nitializer) Server version: 4.4.4 |
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5 | Client version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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6 | os_name: Mac OS X |
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7 | os_arch: x86_64 |
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8 | java_version: 1.6.0_39 |
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9 | os_version: 10.6.8 |
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10 | |
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11 | 2013-02-14 09:41:50,606 INFO [y.shoola.env.data.login.LoginServiceImpl] (nitializer) Logged onto OMERO at: gretzky.openmicroscopy.org.uk |
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12 | User Name: user-2 -- Password: *** |
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13 | |
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14 | 2013-02-14 09:42:42,338 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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15 | 2013-02-14 09:42:42,339 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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16 | 2013-02-14 09:42:42,351 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) Depth: 4 Metadata Level: MINIMUM |
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17 | 2013-02-14 09:42:42,358 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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18 | 2013-02-14 09:42:42,372 DEBUG [ ome.scifio.io.NIOByteBufferProvider] ( Thread-19) Using mapped byte buffer? false |
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19 | 2013-02-14 09:42:42,399 INFO [ loci.formats.FormatHandler] ( Thread-19) CellomicsReader initializing /Users/bpindelski/Desktop/testing/import/cellomics/MFGTMP_081128200001_A02f239d1.C01 |
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20 | 2013-02-14 09:42:42,401 INFO [ loci.formats.FormatHandler] ( Thread-19) Decompressing file |
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21 | 2013-02-14 09:42:42,447 INFO [ loci.formats.FormatHandler] ( Thread-19) Reading header data |
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22 | 2013-02-14 09:42:42,447 INFO [ loci.formats.FormatHandler] ( Thread-19) Populating core metadata |
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23 | 2013-02-14 09:42:42,447 INFO [ loci.formats.FormatHandler] ( Thread-19) Populating metadata store |
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24 | 2013-02-14 09:42:42,487 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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25 | 2013-02-14 09:42:42,487 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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26 | 2013-02-14 09:42:42,505 INFO [ loci.formats.FormatHandler] ( Thread-19) CellomicsReader initializing /Users/bpindelski/Desktop/testing/import/cellomics/MFGTMP_081222130005_E07f00d0.C01 |
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27 | 2013-02-14 09:42:42,505 INFO [ loci.formats.FormatHandler] ( Thread-19) Decompressing file |
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28 | 2013-02-14 09:42:42,516 INFO [ loci.formats.FormatHandler] ( Thread-19) Reading header data |
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29 | 2013-02-14 09:42:42,516 INFO [ loci.formats.FormatHandler] ( Thread-19) Populating core metadata |
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30 | 2013-02-14 09:42:42,516 INFO [ loci.formats.FormatHandler] ( Thread-19) Populating metadata store |
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31 | 2013-02-14 09:42:42,517 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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32 | 2013-02-14 09:42:42,517 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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33 | 2013-02-14 09:42:42,526 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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34 | 2013-02-14 09:42:42,528 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) 5 file(s) parsed into 2 group(s) with 3 call(s) to setId in 174ms. (176ms total) [1 unknowns] |
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35 | 2013-02-14 09:42:42,556 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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36 | 2013-02-14 09:42:42,556 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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37 | 2013-02-14 09:42:42,557 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) Depth: 4 Metadata Level: MINIMUM |
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38 | 2013-02-14 09:42:42,557 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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39 | 2013-02-14 09:42:42,563 INFO [ loci.formats.FormatHandler] ( Thread-19) CellomicsReader initializing /Users/bpindelski/Desktop/testing/import/cellomics/MFGTMP_081222130005_E07f00d0.C01 |
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40 | 2013-02-14 09:42:42,563 INFO [ loci.formats.FormatHandler] ( Thread-19) Decompressing file |
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41 | 2013-02-14 09:42:42,574 INFO [ loci.formats.FormatHandler] ( Thread-19) Reading header data |
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42 | 2013-02-14 09:42:42,574 INFO [ loci.formats.FormatHandler] ( Thread-19) Populating core metadata |
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43 | 2013-02-14 09:42:42,574 INFO [ loci.formats.FormatHandler] ( Thread-19) Populating metadata store |
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44 | 2013-02-14 09:42:42,574 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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45 | 2013-02-14 09:42:42,575 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 17ms. (18ms total) [0 unknowns] |
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46 | 2013-02-14 09:42:42,575 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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47 | 2013-02-14 09:42:42,575 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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48 | 2013-02-14 09:42:42,782 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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49 | 2013-02-14 09:42:42,782 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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50 | 2013-02-14 09:42:46,092 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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51 | 2013-02-14 09:42:46,117 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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52 | 2013-02-14 09:42:46,127 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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53 | 2013-02-14 09:42:46,127 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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54 | 2013-02-14 09:42:46,128 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) Depth: 4 Metadata Level: MINIMUM |
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55 | 2013-02-14 09:42:46,128 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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56 | 2013-02-14 09:42:46,135 INFO [ loci.formats.FormatHandler] ( Thread-19) CellomicsReader initializing /Users/bpindelski/Desktop/testing/import/cellomics/MFGTMP_081128200001_A02f239d1.C01 |
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57 | 2013-02-14 09:42:46,138 INFO [ loci.formats.FormatHandler] ( Thread-19) Decompressing file |
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58 | 2013-02-14 09:42:46,178 INFO [ loci.formats.FormatHandler] ( Thread-19) Reading header data |
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59 | 2013-02-14 09:42:46,178 INFO [ loci.formats.FormatHandler] ( Thread-19) Populating core metadata |
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60 | 2013-02-14 09:42:46,178 INFO [ loci.formats.FormatHandler] ( Thread-19) Populating metadata store |
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61 | 2013-02-14 09:42:46,178 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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62 | 2013-02-14 09:42:46,179 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 50ms. (50ms total) [0 unknowns] |
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63 | 2013-02-14 09:42:46,179 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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64 | 2013-02-14 09:42:46,179 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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65 | 2013-02-14 09:42:46,195 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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66 | 2013-02-14 09:42:46,196 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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67 | 2013-02-14 09:42:48,651 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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68 | 2013-02-14 09:42:48,665 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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69 | 2013-02-14 09:42:48,671 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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70 | 2013-02-14 09:42:48,672 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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71 | 2013-02-14 09:42:48,673 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) Depth: 4 Metadata Level: MINIMUM |
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72 | 2013-02-14 09:42:48,674 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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73 | 2013-02-14 09:42:48,683 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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74 | 2013-02-14 09:42:48,683 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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75 | 2013-02-14 09:42:48,730 INFO [ loci.formats.FormatHandler] ( Thread-19) CellSensReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/anda/_Image_01_V76 K2 11_lung_/stack1/frame_t.ets |
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76 | 2013-02-14 09:42:48,896 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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77 | 2013-02-14 09:42:48,896 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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78 | 2013-02-14 09:42:48,908 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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79 | 2013-02-14 09:42:48,909 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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80 | 2013-02-14 09:42:48,915 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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81 | 2013-02-14 09:42:48,915 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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82 | 2013-02-14 09:42:48,920 INFO [ loci.formats.FormatHandler] ( Thread-19) JPEGReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/anda/Image_01_V76 K2 11_lung.overview.jpg |
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83 | 2013-02-14 09:42:48,920 INFO [ loci.formats.FormatHandler] ( Thread-19) DefaultJPEGReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/anda/Image_01_V76 K2 11_lung.overview.jpg |
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84 | 2013-02-14 09:42:48,920 INFO [ loci.formats.FormatHandler] ( Thread-19) Populating metadata |
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85 | 2013-02-14 09:42:49,707 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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86 | 2013-02-14 09:42:49,707 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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87 | 2013-02-14 09:42:49,708 INFO [ loci.formats.FormatHandler] ( Thread-19) JPEGReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/anda/Image_01_V76 K2 11_lung.thumbnail.jpg |
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88 | 2013-02-14 09:42:49,708 INFO [ loci.formats.FormatHandler] ( Thread-19) DefaultJPEGReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/anda/Image_01_V76 K2 11_lung.thumbnail.jpg |
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89 | 2013-02-14 09:42:49,708 INFO [ loci.formats.FormatHandler] ( Thread-19) Populating metadata |
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90 | 2013-02-14 09:42:49,715 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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91 | 2013-02-14 09:42:49,716 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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92 | 2013-02-14 09:42:49,722 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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93 | 2013-02-14 09:42:49,722 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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94 | 2013-02-14 09:42:49,736 INFO [ loci.formats.FormatHandler] ( Thread-19) CellSensReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/brian/_BZ cfos1-2_05_/stack1/frame_t_0.ets |
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95 | 2013-02-14 09:42:49,781 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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96 | 2013-02-14 09:42:49,782 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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97 | 2013-02-14 09:42:49,797 INFO [ loci.formats.FormatHandler] ( Thread-19) CellSensReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/brian/_Image_28_/stack1/frame_t_0.ets |
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98 | 2013-02-14 09:42:49,838 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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99 | 2013-02-14 09:42:49,839 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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100 | 2013-02-14 09:42:49,853 INFO [ loci.formats.FormatHandler] ( Thread-19) CellSensReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/brian/_SW10082402-02_21_/stack1/frame_t_0.ets |
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101 | 2013-02-14 09:42:49,878 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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102 | 2013-02-14 09:42:49,878 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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103 | 2013-02-14 09:42:49,883 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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104 | 2013-02-14 09:42:49,883 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) 28 file(s) parsed into 6 group(s) with 11 call(s) to setId in 1203ms. (1210ms total) [5 unknowns] |
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105 | 2013-02-14 09:42:49,955 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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106 | 2013-02-14 09:42:49,955 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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107 | 2013-02-14 09:42:49,976 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) Depth: 4 Metadata Level: MINIMUM |
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108 | 2013-02-14 09:42:49,976 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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109 | 2013-02-14 09:42:49,985 INFO [ loci.formats.FormatHandler] ( Thread-19) CellSensReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/brian/_SW10082402-02_21_/stack1/frame_t_0.ets |
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110 | 2013-02-14 09:42:49,995 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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111 | 2013-02-14 09:42:49,996 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 19ms. (20ms total) [0 unknowns] |
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112 | 2013-02-14 09:42:49,996 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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113 | 2013-02-14 09:42:49,996 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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114 | 2013-02-14 09:42:50,012 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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115 | 2013-02-14 09:42:50,012 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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116 | 2013-02-14 09:43:05,124 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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117 | 2013-02-14 09:43:05,152 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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118 | 2013-02-14 09:43:05,549 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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119 | 2013-02-14 09:43:05,549 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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120 | 2013-02-14 09:43:05,550 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) Depth: 4 Metadata Level: MINIMUM |
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121 | 2013-02-14 09:43:05,550 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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122 | 2013-02-14 09:43:05,562 INFO [ loci.formats.FormatHandler] ( Thread-19) CellSensReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/brian/_BZ cfos1-2_05_/stack1/frame_t_0.ets |
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123 | 2013-02-14 09:43:05,577 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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124 | 2013-02-14 09:43:05,578 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 27ms. (27ms total) [0 unknowns] |
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125 | 2013-02-14 09:43:05,578 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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126 | 2013-02-14 09:43:05,578 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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127 | 2013-02-14 09:43:05,592 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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128 | 2013-02-14 09:43:05,592 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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129 | 2013-02-14 09:43:47,285 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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130 | 2013-02-14 09:43:47,306 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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131 | 2013-02-14 09:43:47,678 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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132 | 2013-02-14 09:43:47,678 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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133 | 2013-02-14 09:43:47,680 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) Depth: 4 Metadata Level: MINIMUM |
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134 | 2013-02-14 09:43:47,680 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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135 | 2013-02-14 09:43:47,680 INFO [ loci.formats.FormatHandler] ( Thread-19) JPEGReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/anda/Image_01_V76 K2 11_lung.thumbnail.jpg |
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136 | 2013-02-14 09:43:47,680 INFO [ loci.formats.FormatHandler] ( Thread-19) DefaultJPEGReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/anda/Image_01_V76 K2 11_lung.thumbnail.jpg |
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137 | 2013-02-14 09:43:47,680 INFO [ loci.formats.FormatHandler] ( Thread-19) Populating metadata |
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138 | 2013-02-14 09:43:47,685 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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139 | 2013-02-14 09:43:47,685 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 5ms. (6ms total) [0 unknowns] |
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140 | 2013-02-14 09:43:47,685 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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141 | 2013-02-14 09:43:47,685 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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142 | 2013-02-14 09:43:47,699 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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143 | 2013-02-14 09:43:47,699 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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144 | 2013-02-14 09:43:48,941 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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145 | 2013-02-14 09:43:48,954 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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146 | 2013-02-14 09:43:49,023 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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147 | 2013-02-14 09:43:49,024 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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148 | 2013-02-14 09:43:49,025 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) Depth: 4 Metadata Level: MINIMUM |
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149 | 2013-02-14 09:43:49,025 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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150 | 2013-02-14 09:43:49,027 INFO [ loci.formats.FormatHandler] ( Thread-19) JPEGReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/anda/Image_01_V76 K2 11_lung.overview.jpg |
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151 | 2013-02-14 09:43:49,027 INFO [ loci.formats.FormatHandler] ( Thread-19) DefaultJPEGReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/anda/Image_01_V76 K2 11_lung.overview.jpg |
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152 | 2013-02-14 09:43:49,027 INFO [ loci.formats.FormatHandler] ( Thread-19) Populating metadata |
---|
153 | 2013-02-14 09:43:49,637 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
---|
154 | 2013-02-14 09:43:49,637 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 612ms. (612ms total) [0 unknowns] |
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155 | 2013-02-14 09:43:49,637 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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156 | 2013-02-14 09:43:49,637 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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157 | 2013-02-14 09:43:50,503 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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158 | 2013-02-14 09:43:50,503 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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159 | 2013-02-14 09:43:57,729 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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160 | 2013-02-14 09:43:57,740 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
---|
161 | 2013-02-14 09:43:59,624 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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162 | 2013-02-14 09:43:59,624 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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163 | 2013-02-14 09:43:59,625 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) Depth: 4 Metadata Level: MINIMUM |
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164 | 2013-02-14 09:43:59,625 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
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165 | 2013-02-14 09:43:59,638 INFO [ loci.formats.FormatHandler] ( Thread-19) CellSensReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/anda/_Image_01_V76 K2 11_lung_/stack1/frame_t.ets |
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166 | 2013-02-14 09:43:59,671 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
---|
167 | 2013-02-14 09:43:59,671 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 46ms. (46ms total) [0 unknowns] |
---|
168 | 2013-02-14 09:43:59,672 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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169 | 2013-02-14 09:43:59,672 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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170 | 2013-02-14 09:43:59,686 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
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171 | 2013-02-14 09:43:59,686 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
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172 | 2013-02-14 09:45:52,849 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
---|
173 | 2013-02-14 09:45:53,205 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
---|
174 | 2013-02-14 09:45:53,828 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
---|
175 | 2013-02-14 09:45:53,829 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
---|
176 | 2013-02-14 09:45:53,830 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) Depth: 4 Metadata Level: MINIMUM |
---|
177 | 2013-02-14 09:45:53,830 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
---|
178 | 2013-02-14 09:45:53,842 INFO [ loci.formats.FormatHandler] ( Thread-19) CellSensReader initializing /Users/bpindelski/Desktop/testing/import/cellsens/brian/_Image_28_/stack1/frame_t_0.ets |
---|
179 | 2013-02-14 09:45:53,858 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
---|
180 | 2013-02-14 09:45:53,859 INFO [ ome.formats.importer.ImportCandidates] ( Thread-19) 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 28ms. (29ms total) [0 unknowns] |
---|
181 | 2013-02-14 09:45:53,859 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
---|
182 | 2013-02-14 09:45:53,859 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
---|
183 | 2013-02-14 09:45:53,873 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) OMERO Version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
---|
184 | 2013-02-14 09:45:53,873 INFO [ ome.formats.importer.ImportConfig] ( Thread-19) Bioformats version: 4.5-DEV revision: 6ed780b date: 14 February 2013 |
---|
185 | 2013-02-14 09:47:08,675 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
---|
186 | 2013-02-14 09:47:08,690 DEBUG [ ome.scifio.io.Location] ( Thread-19) Location.mapFile: embedded-stream.raw -> null |
---|
187 | 2013-02-14 09:47:49,392 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
188 | Cannot start the Raw pixels store. |
---|
189 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
190 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
191 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
192 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
193 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
194 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
195 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
196 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
197 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
198 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
199 | at java.lang.Thread.run(Thread.java:680) |
---|
200 | Caused by: omero.MissingPyramidException |
---|
201 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/287_pyramid |
---|
202 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
203 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
204 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
205 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
206 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
207 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
208 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
209 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
210 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
211 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
212 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
213 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
214 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
215 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
216 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
217 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
218 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
219 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
220 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
221 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
222 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
223 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
224 | at $Proxy94.setPixelsId(Unknown Source) |
---|
225 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
226 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
227 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
228 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
229 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
230 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
231 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
232 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
233 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
234 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
235 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
236 | at $Proxy94.setPixelsId(Unknown Source) |
---|
237 | at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) |
---|
238 | at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) |
---|
239 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
240 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
241 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
242 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
243 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
244 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
245 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
246 | at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) |
---|
247 | at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) |
---|
248 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
249 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
250 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
251 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
252 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
253 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
254 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
255 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
256 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
257 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
258 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
259 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
260 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
261 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
262 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
263 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
264 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
265 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
266 | " |
---|
267 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
268 | message = "Missing pyramid:/OMERO/Pixels/287_pyramid" |
---|
269 | backOff = 1078466 |
---|
270 | pixelsID = 287 |
---|
271 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
272 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
273 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
274 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
275 | at java.lang.Class.newInstance0(Class.java:357) |
---|
276 | at java.lang.Class.newInstance(Class.java:310) |
---|
277 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
278 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
279 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
280 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
281 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
282 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
283 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
284 | ... 9 more |
---|
285 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
286 | Cannot start the Raw pixels store. |
---|
287 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
288 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
289 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
290 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
291 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
292 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
293 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
294 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
295 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
296 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
297 | at java.lang.Thread.run(Thread.java:680) |
---|
298 | Caused by: omero.MissingPyramidException |
---|
299 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/287_pyramid |
---|
300 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
301 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
302 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
303 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
304 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
305 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
306 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
307 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
308 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
309 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
310 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
311 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
312 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
313 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
314 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
315 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
316 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
317 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
318 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
319 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
320 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
321 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
322 | at $Proxy94.setPixelsId(Unknown Source) |
---|
323 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
324 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
325 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
326 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
327 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
328 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
329 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
330 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
331 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
332 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
333 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
334 | at $Proxy94.setPixelsId(Unknown Source) |
---|
335 | at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) |
---|
336 | at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) |
---|
337 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
338 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
339 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
340 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
341 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
342 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
343 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
344 | at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) |
---|
345 | at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) |
---|
346 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
347 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
348 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
349 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
350 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
351 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
352 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
353 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
354 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
355 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
356 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
357 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
358 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
359 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
360 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
361 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
362 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
363 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
364 | " |
---|
365 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
366 | message = "Missing pyramid:/OMERO/Pixels/287_pyramid" |
---|
367 | backOff = 1078466 |
---|
368 | pixelsID = 287 |
---|
369 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
370 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
371 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
372 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
373 | at java.lang.Class.newInstance0(Class.java:357) |
---|
374 | at java.lang.Class.newInstance(Class.java:310) |
---|
375 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
376 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
377 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
378 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
379 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
380 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
381 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
382 | ... 9 more |
---|
383 | Exception in thread "AWT-EventQueue-0" |
---|
384 | |
---|
385 | 2013-02-14 09:49:17,786 ERROR [nts.measurement.view.MeasurementViewerUI] (entQueue-0) Problem while handling ROI No ROIShape on coord T: 0 Z: 0 |
---|
386 | 2013-02-14 09:50:16,906 ERROR [nts.measurement.view.MeasurementViewerUI] (entQueue-0) Problem while handling ROI No ROIShape on coord T: 0 Z: 0 |
---|
387 | 2013-02-14 09:51:04,382 ERROR [nts.measurement.view.MeasurementViewerUI] (entQueue-0) Problem while handling ROI No ROIShape on coord T: 0 Z: 0 |
---|
388 | 2013-02-14 09:52:12,453 ERROR [nts.measurement.view.MeasurementViewerUI] (entQueue-0) Problem while handling ROI No ROIShape on coord T: 0 Z: 0 |
---|
389 | 2013-02-14 09:52:55,389 ERROR [nts.measurement.view.MeasurementViewerUI] (entQueue-0) Problem while handling ROI No ROIShape on coord T: 0 Z: 0 |
---|
390 | 2013-02-14 09:55:26,721 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
391 | Cannot start the Raw pixels store. |
---|
392 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
393 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
394 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
395 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
396 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
397 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
398 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
399 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
400 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
401 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
402 | at java.lang.Thread.run(Thread.java:680) |
---|
403 | Caused by: omero.MissingPyramidException |
---|
404 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/287_pyramid |
---|
405 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
406 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
407 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
408 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
409 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
410 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
411 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
412 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
413 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
414 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
415 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
416 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
417 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
418 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
419 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
420 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
421 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
422 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
423 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
424 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
425 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
426 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
427 | at $Proxy94.setPixelsId(Unknown Source) |
---|
428 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
429 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
430 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
431 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
432 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
433 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
434 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
435 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
436 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
437 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
438 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
439 | at $Proxy94.setPixelsId(Unknown Source) |
---|
440 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
441 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
442 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
443 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
444 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
445 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
446 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
447 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
448 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
449 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
450 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
451 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
452 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
453 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
454 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
455 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
456 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
457 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
458 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
459 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
460 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
461 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
462 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
463 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
464 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
465 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
466 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
467 | " |
---|
468 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
469 | message = "Missing pyramid:/OMERO/Pixels/287_pyramid" |
---|
470 | backOff = 1078466 |
---|
471 | pixelsID = 287 |
---|
472 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
473 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
474 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
475 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
476 | at java.lang.Class.newInstance0(Class.java:357) |
---|
477 | at java.lang.Class.newInstance(Class.java:310) |
---|
478 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
479 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
480 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
481 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
482 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
483 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
484 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
485 | ... 9 more |
---|
486 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
487 | Cannot start the Raw pixels store. |
---|
488 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
489 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
490 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
491 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
492 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
493 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
494 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
495 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
496 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
497 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
498 | at java.lang.Thread.run(Thread.java:680) |
---|
499 | Caused by: omero.MissingPyramidException |
---|
500 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/287_pyramid |
---|
501 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
502 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
503 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
504 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
505 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
506 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
507 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
508 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
509 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
510 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
511 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
512 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
513 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
514 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
515 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
516 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
517 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
518 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
519 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
520 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
521 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
522 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
523 | at $Proxy94.setPixelsId(Unknown Source) |
---|
524 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
525 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
526 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
527 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
528 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
529 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
530 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
531 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
532 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
533 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
534 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
535 | at $Proxy94.setPixelsId(Unknown Source) |
---|
536 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
537 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
538 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
539 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
540 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
541 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
542 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
543 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
544 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
545 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
546 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
547 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
548 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
549 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
550 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
551 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
552 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
553 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
554 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
555 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
556 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
557 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
558 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
559 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
560 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
561 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
562 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
563 | " |
---|
564 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
565 | message = "Missing pyramid:/OMERO/Pixels/287_pyramid" |
---|
566 | backOff = 1078466 |
---|
567 | pixelsID = 287 |
---|
568 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
569 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
570 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
571 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
572 | at java.lang.Class.newInstance0(Class.java:357) |
---|
573 | at java.lang.Class.newInstance(Class.java:310) |
---|
574 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
575 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
576 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
577 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
578 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
579 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
580 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
581 | ... 9 more |
---|
582 | Exception in thread "AWT-EventQueue-0" |
---|
583 | |
---|
584 | 2013-02-14 09:55:26,779 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
585 | Cannot start the Raw pixels store. |
---|
586 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
587 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
588 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
589 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
590 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
591 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
592 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
593 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
594 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
595 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
596 | at java.lang.Thread.run(Thread.java:680) |
---|
597 | Caused by: omero.MissingPyramidException |
---|
598 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/287_pyramid |
---|
599 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
600 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
601 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
602 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
603 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
604 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
605 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
606 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
607 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
608 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
609 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
610 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
611 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
612 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
613 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
614 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
615 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
616 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
617 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
618 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
619 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
620 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
621 | at $Proxy94.setPixelsId(Unknown Source) |
---|
622 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
623 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
624 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
625 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
626 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
627 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
628 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
629 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
630 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
631 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
632 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
633 | at $Proxy94.setPixelsId(Unknown Source) |
---|
634 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
635 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
636 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
637 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
638 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
639 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
640 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
641 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
642 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
643 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
644 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
645 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
646 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
647 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
648 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
649 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
650 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
651 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
652 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
653 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
654 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
655 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
656 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
657 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
658 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
659 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
660 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
661 | " |
---|
662 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
663 | message = "Missing pyramid:/OMERO/Pixels/287_pyramid" |
---|
664 | backOff = 1078466 |
---|
665 | pixelsID = 287 |
---|
666 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
667 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
668 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
669 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
670 | at java.lang.Class.newInstance0(Class.java:357) |
---|
671 | at java.lang.Class.newInstance(Class.java:310) |
---|
672 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
673 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
674 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
675 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
676 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
677 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
678 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
679 | ... 9 more |
---|
680 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
681 | Cannot start the Raw pixels store. |
---|
682 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
683 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
684 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
685 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
686 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
687 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
688 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
689 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
690 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
691 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
692 | at java.lang.Thread.run(Thread.java:680) |
---|
693 | Caused by: omero.MissingPyramidException |
---|
694 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/287_pyramid |
---|
695 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
696 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
697 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
698 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
699 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
700 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
701 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
702 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
703 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
704 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
705 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
706 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
707 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
708 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
709 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
710 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
711 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
712 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
713 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
714 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
715 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
716 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
717 | at $Proxy94.setPixelsId(Unknown Source) |
---|
718 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
719 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
720 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
721 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
722 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
723 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
724 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
725 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
726 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
727 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
728 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
729 | at $Proxy94.setPixelsId(Unknown Source) |
---|
730 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
731 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
732 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
733 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
734 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
735 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
736 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
737 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
738 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
739 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
740 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
741 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
742 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
743 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
744 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
745 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
746 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
747 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
748 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
749 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
750 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
751 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
752 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
753 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
754 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
755 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
756 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
757 | " |
---|
758 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
759 | message = "Missing pyramid:/OMERO/Pixels/287_pyramid" |
---|
760 | backOff = 1078466 |
---|
761 | pixelsID = 287 |
---|
762 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
763 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
764 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
765 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
766 | at java.lang.Class.newInstance0(Class.java:357) |
---|
767 | at java.lang.Class.newInstance(Class.java:310) |
---|
768 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
769 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
770 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
771 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
772 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
773 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
774 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
775 | ... 9 more |
---|
776 | Exception in thread "AWT-EventQueue-0" |
---|
777 | |
---|
778 | 2013-02-14 09:55:30,195 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
779 | Cannot start the Raw pixels store. |
---|
780 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
781 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
782 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
783 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
784 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
785 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
786 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
787 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
788 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
789 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
790 | at java.lang.Thread.run(Thread.java:680) |
---|
791 | Caused by: omero.MissingPyramidException |
---|
792 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/288_pyramid |
---|
793 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
794 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
795 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
796 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
797 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
798 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
799 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
800 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
801 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
802 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
803 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
804 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
805 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
806 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
807 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
808 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
809 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
810 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
811 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
812 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
813 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
814 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
815 | at $Proxy94.setPixelsId(Unknown Source) |
---|
816 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
817 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
818 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
819 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
820 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
821 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
822 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
823 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
824 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
825 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
826 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
827 | at $Proxy94.setPixelsId(Unknown Source) |
---|
828 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
829 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
830 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
831 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
832 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
833 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
834 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
835 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
836 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
837 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
838 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
839 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
840 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
841 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
842 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
843 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
844 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
845 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
846 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
847 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
848 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
849 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
850 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
851 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
852 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
853 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
854 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
855 | " |
---|
856 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
857 | message = "Missing pyramid:/OMERO/Pixels/288_pyramid" |
---|
858 | backOff = 18478108 |
---|
859 | pixelsID = 288 |
---|
860 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
861 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
862 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
863 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
864 | at java.lang.Class.newInstance0(Class.java:357) |
---|
865 | at java.lang.Class.newInstance(Class.java:310) |
---|
866 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
867 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
868 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
869 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
870 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
871 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
872 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
873 | ... 9 more |
---|
874 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
875 | Cannot start the Raw pixels store. |
---|
876 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
877 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
878 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
879 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
880 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
881 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
882 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
883 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
884 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
885 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
886 | at java.lang.Thread.run(Thread.java:680) |
---|
887 | Caused by: omero.MissingPyramidException |
---|
888 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/288_pyramid |
---|
889 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
890 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
891 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
892 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
893 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
894 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
895 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
896 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
897 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
898 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
899 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
900 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
901 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
902 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
903 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
904 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
905 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
906 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
907 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
908 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
909 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
910 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
911 | at $Proxy94.setPixelsId(Unknown Source) |
---|
912 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
913 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
914 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
915 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
916 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
917 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
918 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
919 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
920 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
921 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
922 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
923 | at $Proxy94.setPixelsId(Unknown Source) |
---|
924 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
925 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
926 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
927 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
928 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
929 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
930 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
931 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
932 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
933 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
934 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
935 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
936 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
937 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
938 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
939 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
940 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
941 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
942 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
943 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
944 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
945 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
946 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
947 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
948 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
949 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
950 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
951 | " |
---|
952 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
953 | message = "Missing pyramid:/OMERO/Pixels/288_pyramid" |
---|
954 | backOff = 18478108 |
---|
955 | pixelsID = 288 |
---|
956 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
957 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
958 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
959 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
960 | at java.lang.Class.newInstance0(Class.java:357) |
---|
961 | at java.lang.Class.newInstance(Class.java:310) |
---|
962 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
963 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
964 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
965 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
966 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
967 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
968 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
969 | ... 9 more |
---|
970 | Exception in thread "AWT-EventQueue-0" |
---|
971 | |
---|
972 | 2013-02-14 09:55:30,379 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
973 | Cannot start the Raw pixels store. |
---|
974 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
975 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
976 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
977 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
978 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
979 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
980 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
981 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
982 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
983 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
984 | at java.lang.Thread.run(Thread.java:680) |
---|
985 | Caused by: omero.MissingPyramidException |
---|
986 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/288_pyramid |
---|
987 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
988 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
989 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
990 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
991 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
992 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
993 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
994 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
995 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
996 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
997 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
998 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
999 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
1000 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
1001 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1002 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
1003 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1004 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
1005 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1006 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
1007 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1008 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1009 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1010 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1011 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1012 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1013 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1014 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1015 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1016 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
1017 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1018 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
1019 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1020 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1021 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1022 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
1023 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1024 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1025 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
1026 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
1027 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
1028 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
1029 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
1030 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
1031 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1032 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1033 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1034 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1035 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1036 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
1037 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1038 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1039 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
1040 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
1041 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
1042 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
1043 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
1044 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
1045 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
1046 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
1047 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
1048 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
1049 | " |
---|
1050 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
1051 | message = "Missing pyramid:/OMERO/Pixels/288_pyramid" |
---|
1052 | backOff = 18478108 |
---|
1053 | pixelsID = 288 |
---|
1054 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
1055 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
1056 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
1057 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
1058 | at java.lang.Class.newInstance0(Class.java:357) |
---|
1059 | at java.lang.Class.newInstance(Class.java:310) |
---|
1060 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
1061 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
1062 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
1063 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
1064 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
1065 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
1066 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
1067 | ... 9 more |
---|
1068 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
1069 | Cannot start the Raw pixels store. |
---|
1070 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
1071 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
1072 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
1073 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
1074 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
1075 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
1076 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
1077 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
1078 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
1079 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
1080 | at java.lang.Thread.run(Thread.java:680) |
---|
1081 | Caused by: omero.MissingPyramidException |
---|
1082 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/288_pyramid |
---|
1083 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
1084 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
1085 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
1086 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
1087 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1088 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1089 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1090 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1091 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1092 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1093 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
1094 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1095 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
1096 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
1097 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1098 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
1099 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1100 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
1101 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1102 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
1103 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1104 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1105 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1106 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1107 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1108 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1109 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1110 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1111 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1112 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
1113 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1114 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
1115 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1116 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1117 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1118 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
1119 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1120 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1121 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
1122 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
1123 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
1124 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
1125 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
1126 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
1127 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1128 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1129 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1130 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1131 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1132 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
1133 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1134 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1135 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
1136 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
1137 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
1138 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
1139 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
1140 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
1141 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
1142 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
1143 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
1144 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
1145 | " |
---|
1146 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
1147 | message = "Missing pyramid:/OMERO/Pixels/288_pyramid" |
---|
1148 | backOff = 18478108 |
---|
1149 | pixelsID = 288 |
---|
1150 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
1151 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
1152 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
1153 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
1154 | at java.lang.Class.newInstance0(Class.java:357) |
---|
1155 | at java.lang.Class.newInstance(Class.java:310) |
---|
1156 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
1157 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
1158 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
1159 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
1160 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
1161 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
1162 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
1163 | ... 9 more |
---|
1164 | Exception in thread "AWT-EventQueue-0" |
---|
1165 | |
---|
1166 | 2013-02-14 09:55:32,484 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
1167 | Cannot start the Raw pixels store. |
---|
1168 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
1169 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
1170 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
1171 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
1172 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
1173 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
1174 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
1175 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
1176 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
1177 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
1178 | at java.lang.Thread.run(Thread.java:680) |
---|
1179 | Caused by: omero.MissingPyramidException |
---|
1180 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/296_pyramid |
---|
1181 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
1182 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
1183 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
1184 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
1185 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1186 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1187 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1188 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1189 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1190 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1191 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
1192 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1193 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
1194 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
1195 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1196 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
1197 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1198 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
1199 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1200 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
1201 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1202 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1203 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1204 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1205 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1206 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1207 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1208 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1209 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1210 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
1211 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1212 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
1213 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1214 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1215 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1216 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
1217 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1218 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1219 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
1220 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
1221 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
1222 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
1223 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
1224 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
1225 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1226 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1227 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1228 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1229 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1230 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
1231 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1232 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1233 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
1234 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
1235 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
1236 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
1237 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
1238 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
1239 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
1240 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
1241 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
1242 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
1243 | " |
---|
1244 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
1245 | message = "Missing pyramid:/OMERO/Pixels/296_pyramid" |
---|
1246 | backOff = 1937618 |
---|
1247 | pixelsID = 296 |
---|
1248 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
1249 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
1250 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
1251 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
1252 | at java.lang.Class.newInstance0(Class.java:357) |
---|
1253 | at java.lang.Class.newInstance(Class.java:310) |
---|
1254 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
1255 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
1256 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
1257 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
1258 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
1259 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
1260 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
1261 | ... 9 more |
---|
1262 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
1263 | Cannot start the Raw pixels store. |
---|
1264 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
1265 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
1266 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
1267 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
1268 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
1269 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
1270 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
1271 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
1272 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
1273 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
1274 | at java.lang.Thread.run(Thread.java:680) |
---|
1275 | Caused by: omero.MissingPyramidException |
---|
1276 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/296_pyramid |
---|
1277 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
1278 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
1279 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
1280 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
1281 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1282 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1283 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1284 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1285 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1286 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1287 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
1288 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1289 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
1290 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
1291 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1292 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
1293 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1294 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
1295 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1296 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
1297 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1298 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1299 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1300 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1301 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1302 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1303 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1304 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1305 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1306 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
1307 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1308 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
1309 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1310 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1311 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1312 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
1313 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1314 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1315 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
1316 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
1317 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
1318 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
1319 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
1320 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
1321 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1322 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1323 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1324 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1325 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1326 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
1327 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1328 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1329 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
1330 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
1331 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
1332 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
1333 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
1334 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
1335 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
1336 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
1337 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
1338 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
1339 | " |
---|
1340 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
1341 | message = "Missing pyramid:/OMERO/Pixels/296_pyramid" |
---|
1342 | backOff = 1937618 |
---|
1343 | pixelsID = 296 |
---|
1344 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
1345 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
1346 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
1347 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
1348 | at java.lang.Class.newInstance0(Class.java:357) |
---|
1349 | at java.lang.Class.newInstance(Class.java:310) |
---|
1350 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
1351 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
1352 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
1353 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
1354 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
1355 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
1356 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
1357 | ... 9 more |
---|
1358 | Exception in thread "AWT-EventQueue-0" |
---|
1359 | |
---|
1360 | 2013-02-14 09:55:32,814 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
1361 | Cannot start the Raw pixels store. |
---|
1362 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
1363 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
1364 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
1365 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
1366 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
1367 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
1368 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
1369 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
1370 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
1371 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
1372 | at java.lang.Thread.run(Thread.java:680) |
---|
1373 | Caused by: omero.MissingPyramidException |
---|
1374 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/296_pyramid |
---|
1375 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
1376 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
1377 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
1378 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
1379 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1380 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1381 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1382 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1383 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1384 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1385 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
1386 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1387 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
1388 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
1389 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1390 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
1391 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1392 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
1393 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1394 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
1395 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1396 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1397 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1398 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1399 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1400 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1401 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1402 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1403 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1404 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
1405 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1406 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
1407 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1408 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1409 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1410 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
1411 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1412 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1413 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
1414 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
1415 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
1416 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
1417 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
1418 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
1419 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1420 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1421 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1422 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1423 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1424 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
1425 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1426 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1427 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
1428 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
1429 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
1430 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
1431 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
1432 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
1433 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
1434 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
1435 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
1436 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
1437 | " |
---|
1438 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
1439 | message = "Missing pyramid:/OMERO/Pixels/296_pyramid" |
---|
1440 | backOff = 1937618 |
---|
1441 | pixelsID = 296 |
---|
1442 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
1443 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
1444 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
1445 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
1446 | at java.lang.Class.newInstance0(Class.java:357) |
---|
1447 | at java.lang.Class.newInstance(Class.java:310) |
---|
1448 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
1449 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
1450 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
1451 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
1452 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
1453 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
1454 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
1455 | ... 9 more |
---|
1456 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
1457 | Cannot start the Raw pixels store. |
---|
1458 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
1459 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
1460 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
1461 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
1462 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
1463 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
1464 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
1465 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
1466 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
1467 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
1468 | at java.lang.Thread.run(Thread.java:680) |
---|
1469 | Caused by: omero.MissingPyramidException |
---|
1470 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/296_pyramid |
---|
1471 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
1472 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
1473 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
1474 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
1475 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1476 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1477 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1478 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1479 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1480 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1481 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
1482 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1483 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
1484 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
1485 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1486 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
1487 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1488 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
1489 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1490 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
1491 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1492 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1493 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1494 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1495 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1496 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1497 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1498 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1499 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1500 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
1501 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1502 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
1503 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1504 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1505 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1506 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
1507 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1508 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1509 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
1510 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
1511 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
1512 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
1513 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
1514 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
1515 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1516 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1517 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1518 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1519 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1520 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
1521 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1522 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1523 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
1524 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
1525 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
1526 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
1527 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
1528 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
1529 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
1530 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
1531 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
1532 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
1533 | " |
---|
1534 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
1535 | message = "Missing pyramid:/OMERO/Pixels/296_pyramid" |
---|
1536 | backOff = 1937618 |
---|
1537 | pixelsID = 296 |
---|
1538 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
1539 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
1540 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
1541 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
1542 | at java.lang.Class.newInstance0(Class.java:357) |
---|
1543 | at java.lang.Class.newInstance(Class.java:310) |
---|
1544 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
1545 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
1546 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
1547 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
1548 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
1549 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
1550 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
1551 | ... 9 more |
---|
1552 | Exception in thread "AWT-EventQueue-0" |
---|
1553 | |
---|
1554 | 2013-02-14 10:02:05,909 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
1555 | Cannot start the Raw pixels store. |
---|
1556 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
1557 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
1558 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
1559 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
1560 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
1561 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
1562 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
1563 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
1564 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
1565 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
1566 | at java.lang.Thread.run(Thread.java:680) |
---|
1567 | Caused by: omero.MissingPyramidException |
---|
1568 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/287_pyramid |
---|
1569 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
1570 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
1571 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
1572 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
1573 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1574 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1575 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1576 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1577 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1578 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1579 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
1580 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1581 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
1582 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
1583 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1584 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
1585 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1586 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
1587 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1588 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
1589 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1590 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1591 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1592 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1593 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1594 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1595 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1596 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1597 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1598 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
1599 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1600 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
1601 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1602 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1603 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1604 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
1605 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1606 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1607 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
1608 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
1609 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
1610 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
1611 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
1612 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
1613 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1614 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1615 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1616 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1617 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1618 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
1619 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1620 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1621 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
1622 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
1623 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
1624 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
1625 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
1626 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
1627 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
1628 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
1629 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
1630 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
1631 | " |
---|
1632 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
1633 | message = "Missing pyramid:/OMERO/Pixels/287_pyramid" |
---|
1634 | backOff = 1078466 |
---|
1635 | pixelsID = 287 |
---|
1636 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
1637 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
1638 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
1639 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
1640 | at java.lang.Class.newInstance0(Class.java:357) |
---|
1641 | at java.lang.Class.newInstance(Class.java:310) |
---|
1642 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
1643 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
1644 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
1645 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
1646 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
1647 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
1648 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
1649 | ... 9 more |
---|
1650 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
1651 | Cannot start the Raw pixels store. |
---|
1652 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
1653 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
1654 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
1655 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
1656 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
1657 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
1658 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
1659 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
1660 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
1661 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
1662 | at java.lang.Thread.run(Thread.java:680) |
---|
1663 | Caused by: omero.MissingPyramidException |
---|
1664 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/287_pyramid |
---|
1665 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
1666 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
1667 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
1668 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
1669 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1670 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1671 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1672 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1673 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1674 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1675 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
1676 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1677 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
1678 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
1679 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1680 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
1681 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1682 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
1683 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1684 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
1685 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1686 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1687 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1688 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1689 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1690 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1691 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1692 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1693 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1694 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
1695 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1696 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
1697 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1698 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1699 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1700 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
1701 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1702 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1703 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
1704 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
1705 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
1706 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
1707 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
1708 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
1709 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1710 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1711 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1712 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1713 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1714 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
1715 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1716 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1717 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
1718 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
1719 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
1720 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
1721 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
1722 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
1723 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
1724 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
1725 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
1726 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
1727 | " |
---|
1728 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
1729 | message = "Missing pyramid:/OMERO/Pixels/287_pyramid" |
---|
1730 | backOff = 1078466 |
---|
1731 | pixelsID = 287 |
---|
1732 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
1733 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
1734 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
1735 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
1736 | at java.lang.Class.newInstance0(Class.java:357) |
---|
1737 | at java.lang.Class.newInstance(Class.java:310) |
---|
1738 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
1739 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
1740 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
1741 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
1742 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
1743 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
1744 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
1745 | ... 9 more |
---|
1746 | Exception in thread "AWT-EventQueue-0" |
---|
1747 | |
---|
1748 | 2013-02-14 11:03:37,195 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
1749 | Cannot start the Raw pixels store. |
---|
1750 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
1751 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
1752 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
1753 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
1754 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
1755 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
1756 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
1757 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
1758 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
1759 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
1760 | at java.lang.Thread.run(Thread.java:680) |
---|
1761 | Caused by: omero.MissingPyramidException |
---|
1762 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/287_pyramid |
---|
1763 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
1764 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
1765 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
1766 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
1767 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1768 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1769 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1770 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1771 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1772 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1773 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
1774 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1775 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
1776 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
1777 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1778 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
1779 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1780 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
1781 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1782 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
1783 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1784 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1785 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1786 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1787 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1788 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1789 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1790 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1791 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1792 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
1793 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1794 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
1795 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1796 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1797 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1798 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
1799 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1800 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1801 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
1802 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
1803 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
1804 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
1805 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
1806 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
1807 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1808 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1809 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1810 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1811 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1812 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
1813 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1814 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1815 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
1816 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
1817 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
1818 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
1819 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
1820 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
1821 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
1822 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
1823 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
1824 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
1825 | " |
---|
1826 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
1827 | message = "Missing pyramid:/OMERO/Pixels/287_pyramid" |
---|
1828 | backOff = 1078466 |
---|
1829 | pixelsID = 287 |
---|
1830 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
1831 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
1832 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
1833 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
1834 | at java.lang.Class.newInstance0(Class.java:357) |
---|
1835 | at java.lang.Class.newInstance(Class.java:310) |
---|
1836 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
1837 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
1838 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
1839 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
1840 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
1841 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
1842 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
1843 | ... 9 more |
---|
1844 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
1845 | Cannot start the Raw pixels store. |
---|
1846 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
1847 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
1848 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
1849 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
1850 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
1851 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
1852 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
1853 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
1854 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
1855 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
1856 | at java.lang.Thread.run(Thread.java:680) |
---|
1857 | Caused by: omero.MissingPyramidException |
---|
1858 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/287_pyramid |
---|
1859 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
1860 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
1861 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
1862 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
1863 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1864 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1865 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1866 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1867 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1868 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1869 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
1870 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1871 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
1872 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
1873 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1874 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
1875 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1876 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
1877 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1878 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
1879 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1880 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1881 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1882 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1883 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1884 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1885 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1886 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1887 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1888 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
1889 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1890 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
1891 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1892 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1893 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1894 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
1895 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1896 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1897 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
1898 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
1899 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
1900 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
1901 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
1902 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
1903 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1904 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1905 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1906 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1907 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1908 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
1909 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1910 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1911 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
1912 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
1913 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
1914 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
1915 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
1916 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
1917 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
1918 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
1919 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
1920 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
1921 | " |
---|
1922 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
1923 | message = "Missing pyramid:/OMERO/Pixels/287_pyramid" |
---|
1924 | backOff = 1078466 |
---|
1925 | pixelsID = 287 |
---|
1926 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
1927 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
1928 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
1929 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
1930 | at java.lang.Class.newInstance0(Class.java:357) |
---|
1931 | at java.lang.Class.newInstance(Class.java:310) |
---|
1932 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
1933 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
1934 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
1935 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
1936 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
1937 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
1938 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
1939 | ... 9 more |
---|
1940 | Exception in thread "AWT-EventQueue-0" |
---|
1941 | |
---|
1942 | 2013-02-14 11:03:39,638 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
1943 | Cannot start the Raw pixels store. |
---|
1944 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
1945 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
1946 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
1947 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
1948 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
1949 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
1950 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
1951 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
1952 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
1953 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
1954 | at java.lang.Thread.run(Thread.java:680) |
---|
1955 | Caused by: omero.MissingPyramidException |
---|
1956 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/288_pyramid |
---|
1957 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
1958 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
1959 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
1960 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
1961 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1962 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1963 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1964 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1965 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1966 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1967 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
1968 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1969 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
1970 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
1971 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1972 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
1973 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1974 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
1975 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1976 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
1977 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1978 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1979 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1980 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
1981 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1982 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1983 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
1984 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
1985 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
1986 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
1987 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1988 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
1989 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
1990 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
1991 | at $Proxy94.setPixelsId(Unknown Source) |
---|
1992 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
1993 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
1994 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
1995 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
1996 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
1997 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
1998 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
1999 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
2000 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
2001 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2002 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2003 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2004 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2005 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2006 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
2007 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2008 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2009 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
2010 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
2011 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
2012 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
2013 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
2014 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
2015 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
2016 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
2017 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
2018 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
2019 | " |
---|
2020 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
2021 | message = "Missing pyramid:/OMERO/Pixels/288_pyramid" |
---|
2022 | backOff = 18478108 |
---|
2023 | pixelsID = 288 |
---|
2024 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
2025 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
2026 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
2027 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
2028 | at java.lang.Class.newInstance0(Class.java:357) |
---|
2029 | at java.lang.Class.newInstance(Class.java:310) |
---|
2030 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
2031 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
2032 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
2033 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
2034 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
2035 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
2036 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
2037 | ... 9 more |
---|
2038 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
2039 | Cannot start the Raw pixels store. |
---|
2040 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
2041 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
2042 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
2043 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
2044 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
2045 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
2046 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
2047 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
2048 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
2049 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
2050 | at java.lang.Thread.run(Thread.java:680) |
---|
2051 | Caused by: omero.MissingPyramidException |
---|
2052 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/288_pyramid |
---|
2053 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
2054 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
2055 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
2056 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
2057 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2058 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2059 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2060 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2061 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2062 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2063 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
2064 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2065 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
2066 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
2067 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2068 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
2069 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2070 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
2071 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2072 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
2073 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2074 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2075 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2076 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2077 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2078 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2079 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2080 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2081 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2082 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
2083 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2084 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
2085 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2086 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2087 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2088 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
2089 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2090 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2091 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
2092 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
2093 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
2094 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
2095 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
2096 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
2097 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2098 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2099 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2100 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2101 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2102 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
2103 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2104 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2105 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
2106 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
2107 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
2108 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
2109 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
2110 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
2111 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
2112 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
2113 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
2114 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
2115 | " |
---|
2116 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
2117 | message = "Missing pyramid:/OMERO/Pixels/288_pyramid" |
---|
2118 | backOff = 18478108 |
---|
2119 | pixelsID = 288 |
---|
2120 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
2121 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
2122 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
2123 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
2124 | at java.lang.Class.newInstance0(Class.java:357) |
---|
2125 | at java.lang.Class.newInstance(Class.java:310) |
---|
2126 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
2127 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
2128 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
2129 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
2130 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
2131 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
2132 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
2133 | ... 9 more |
---|
2134 | Exception in thread "AWT-EventQueue-0" |
---|
2135 | |
---|
2136 | 2013-02-14 11:03:43,656 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
2137 | Cannot start the Raw pixels store. |
---|
2138 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
2139 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
2140 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
2141 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
2142 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
2143 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
2144 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
2145 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
2146 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
2147 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
2148 | at java.lang.Thread.run(Thread.java:680) |
---|
2149 | Caused by: omero.MissingPyramidException |
---|
2150 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/285_pyramid |
---|
2151 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
2152 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
2153 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
2154 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
2155 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2156 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2157 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2158 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2159 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2160 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2161 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
2162 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2163 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
2164 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
2165 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2166 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
2167 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2168 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
2169 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2170 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
2171 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2172 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2173 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2174 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2175 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2176 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2177 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2178 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2179 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2180 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
2181 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2182 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
2183 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2184 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2185 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2186 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
2187 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2188 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2189 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
2190 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
2191 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
2192 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
2193 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
2194 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
2195 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2196 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2197 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2198 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2199 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2200 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
2201 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2202 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2203 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
2204 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
2205 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
2206 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
2207 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
2208 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
2209 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
2210 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
2211 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
2212 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
2213 | " |
---|
2214 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
2215 | message = "Missing pyramid:/OMERO/Pixels/285_pyramid" |
---|
2216 | backOff = 269616 |
---|
2217 | pixelsID = 285 |
---|
2218 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
2219 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
2220 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
2221 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
2222 | at java.lang.Class.newInstance0(Class.java:357) |
---|
2223 | at java.lang.Class.newInstance(Class.java:310) |
---|
2224 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
2225 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
2226 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
2227 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
2228 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
2229 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
2230 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
2231 | ... 9 more |
---|
2232 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
2233 | Cannot start the Raw pixels store. |
---|
2234 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
2235 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
2236 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
2237 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
2238 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
2239 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
2240 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
2241 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
2242 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
2243 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
2244 | at java.lang.Thread.run(Thread.java:680) |
---|
2245 | Caused by: omero.MissingPyramidException |
---|
2246 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/285_pyramid |
---|
2247 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
2248 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
2249 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
2250 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
2251 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2252 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2253 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2254 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2255 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2256 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2257 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
2258 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2259 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
2260 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
2261 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2262 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
2263 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2264 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
2265 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2266 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
2267 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2268 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2269 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2270 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2271 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2272 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2273 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2274 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2275 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2276 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
2277 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2278 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
2279 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2280 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2281 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2282 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
2283 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2284 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2285 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
2286 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
2287 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
2288 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
2289 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
2290 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
2291 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2292 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2293 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2294 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2295 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2296 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
2297 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2298 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2299 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
2300 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
2301 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
2302 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
2303 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
2304 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
2305 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
2306 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
2307 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
2308 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
2309 | " |
---|
2310 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
2311 | message = "Missing pyramid:/OMERO/Pixels/285_pyramid" |
---|
2312 | backOff = 269616 |
---|
2313 | pixelsID = 285 |
---|
2314 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
2315 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
2316 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
2317 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
2318 | at java.lang.Class.newInstance0(Class.java:357) |
---|
2319 | at java.lang.Class.newInstance(Class.java:310) |
---|
2320 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
2321 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
2322 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
2323 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
2324 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
2325 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
2326 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
2327 | ... 9 more |
---|
2328 | Exception in thread "AWT-EventQueue-0" |
---|
2329 | |
---|
2330 | 2013-02-14 11:03:44,579 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
2331 | Cannot start the Raw pixels store. |
---|
2332 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
2333 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
2334 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
2335 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
2336 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
2337 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
2338 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
2339 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
2340 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
2341 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
2342 | at java.lang.Thread.run(Thread.java:680) |
---|
2343 | Caused by: omero.MissingPyramidException |
---|
2344 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/281_pyramid |
---|
2345 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
2346 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
2347 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
2348 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
2349 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2350 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2351 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2352 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2353 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2354 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2355 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
2356 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2357 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
2358 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
2359 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2360 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
2361 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2362 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
2363 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2364 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
2365 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2366 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2367 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2368 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2369 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2370 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2371 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2372 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2373 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2374 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
2375 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2376 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
2377 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2378 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2379 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2380 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
2381 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2382 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2383 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
2384 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
2385 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
2386 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
2387 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
2388 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
2389 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2390 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2391 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2392 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2393 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2394 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
2395 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2396 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2397 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
2398 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
2399 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
2400 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
2401 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
2402 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
2403 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
2404 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
2405 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
2406 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
2407 | " |
---|
2408 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
2409 | message = "Missing pyramid:/OMERO/Pixels/281_pyramid" |
---|
2410 | backOff = 4117780 |
---|
2411 | pixelsID = 281 |
---|
2412 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
2413 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
2414 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
2415 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
2416 | at java.lang.Class.newInstance0(Class.java:357) |
---|
2417 | at java.lang.Class.newInstance(Class.java:310) |
---|
2418 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
2419 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
2420 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
2421 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
2422 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
2423 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
2424 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
2425 | ... 9 more |
---|
2426 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
2427 | Cannot start the Raw pixels store. |
---|
2428 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
2429 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
2430 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
2431 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
2432 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
2433 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
2434 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
2435 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
2436 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
2437 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
2438 | at java.lang.Thread.run(Thread.java:680) |
---|
2439 | Caused by: omero.MissingPyramidException |
---|
2440 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/281_pyramid |
---|
2441 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
2442 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
2443 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
2444 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
2445 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2446 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2447 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2448 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2449 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2450 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2451 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
2452 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2453 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
2454 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
2455 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2456 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
2457 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2458 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
2459 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2460 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
2461 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2462 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2463 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2464 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2465 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2466 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2467 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2468 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2469 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2470 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
2471 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2472 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
2473 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2474 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2475 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2476 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
2477 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2478 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2479 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
2480 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
2481 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
2482 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
2483 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
2484 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
2485 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2486 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2487 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2488 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2489 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2490 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
2491 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2492 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2493 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
2494 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
2495 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
2496 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
2497 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
2498 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
2499 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
2500 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
2501 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
2502 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
2503 | " |
---|
2504 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
2505 | message = "Missing pyramid:/OMERO/Pixels/281_pyramid" |
---|
2506 | backOff = 4117780 |
---|
2507 | pixelsID = 281 |
---|
2508 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
2509 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
2510 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
2511 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
2512 | at java.lang.Class.newInstance0(Class.java:357) |
---|
2513 | at java.lang.Class.newInstance(Class.java:310) |
---|
2514 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
2515 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
2516 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
2517 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
2518 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
2519 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
2520 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
2521 | ... 9 more |
---|
2522 | Exception in thread "AWT-EventQueue-0" |
---|
2523 | |
---|
2524 | 2013-02-14 11:03:46,499 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
2525 | Cannot start the Raw pixels store. |
---|
2526 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
2527 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
2528 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
2529 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
2530 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
2531 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
2532 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
2533 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
2534 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
2535 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
2536 | at java.lang.Thread.run(Thread.java:680) |
---|
2537 | Caused by: omero.MissingPyramidException |
---|
2538 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/296_pyramid |
---|
2539 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
2540 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
2541 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
2542 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
2543 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2544 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2545 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2546 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2547 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2548 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2549 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
2550 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2551 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
2552 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
2553 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2554 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
2555 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2556 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
2557 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2558 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
2559 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2560 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2561 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2562 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2563 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2564 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2565 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2566 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2567 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2568 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
2569 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2570 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
2571 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2572 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2573 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2574 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
2575 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2576 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2577 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
2578 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
2579 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
2580 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
2581 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
2582 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
2583 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2584 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2585 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2586 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2587 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2588 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
2589 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2590 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2591 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
2592 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
2593 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
2594 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
2595 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
2596 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
2597 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
2598 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
2599 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
2600 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
2601 | " |
---|
2602 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
2603 | message = "Missing pyramid:/OMERO/Pixels/296_pyramid" |
---|
2604 | backOff = 1937618 |
---|
2605 | pixelsID = 296 |
---|
2606 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
2607 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
2608 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
2609 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
2610 | at java.lang.Class.newInstance0(Class.java:357) |
---|
2611 | at java.lang.Class.newInstance(Class.java:310) |
---|
2612 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
2613 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
2614 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
2615 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
2616 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
2617 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
2618 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
2619 | ... 9 more |
---|
2620 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
2621 | Cannot start the Raw pixels store. |
---|
2622 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
2623 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
2624 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
2625 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
2626 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
2627 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
2628 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
2629 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
2630 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
2631 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
2632 | at java.lang.Thread.run(Thread.java:680) |
---|
2633 | Caused by: omero.MissingPyramidException |
---|
2634 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/296_pyramid |
---|
2635 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
2636 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
2637 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
2638 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
2639 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2640 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2641 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2642 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2643 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2644 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2645 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
2646 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2647 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
2648 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
2649 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2650 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
2651 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2652 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
2653 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2654 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
2655 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2656 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2657 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2658 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2659 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2660 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2661 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2662 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2663 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2664 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
2665 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2666 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
2667 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2668 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2669 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2670 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
2671 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2672 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2673 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
2674 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
2675 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
2676 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
2677 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
2678 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
2679 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2680 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2681 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2682 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2683 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2684 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
2685 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2686 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2687 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
2688 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
2689 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
2690 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
2691 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
2692 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
2693 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
2694 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
2695 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
2696 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
2697 | " |
---|
2698 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
2699 | message = "Missing pyramid:/OMERO/Pixels/296_pyramid" |
---|
2700 | backOff = 1937618 |
---|
2701 | pixelsID = 296 |
---|
2702 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
2703 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
2704 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
2705 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
2706 | at java.lang.Class.newInstance0(Class.java:357) |
---|
2707 | at java.lang.Class.newInstance(Class.java:310) |
---|
2708 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
2709 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
2710 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
2711 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
2712 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
2713 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
2714 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
2715 | ... 9 more |
---|
2716 | Exception in thread "AWT-EventQueue-0" |
---|
2717 | |
---|
2718 | 2013-02-14 11:03:48,826 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
2719 | Cannot start the Raw pixels store. |
---|
2720 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
2721 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
2722 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
2723 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
2724 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
2725 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
2726 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
2727 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
2728 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
2729 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
2730 | at java.lang.Thread.run(Thread.java:680) |
---|
2731 | Caused by: omero.MissingPyramidException |
---|
2732 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/278_pyramid |
---|
2733 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
2734 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
2735 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
2736 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
2737 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2738 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2739 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2740 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2741 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2742 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2743 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
2744 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2745 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
2746 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
2747 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2748 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
2749 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2750 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
2751 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2752 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
2753 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2754 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2755 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2756 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2757 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2758 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2759 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2760 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2761 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2762 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
2763 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2764 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
2765 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2766 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2767 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2768 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
2769 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2770 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2771 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
2772 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
2773 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
2774 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
2775 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
2776 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
2777 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2778 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2779 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2780 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2781 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2782 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
2783 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2784 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2785 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
2786 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
2787 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
2788 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
2789 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
2790 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
2791 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
2792 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
2793 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
2794 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
2795 | " |
---|
2796 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
2797 | message = "Missing pyramid:/OMERO/Pixels/278_pyramid" |
---|
2798 | backOff = 713691 |
---|
2799 | pixelsID = 278 |
---|
2800 | at sun.reflect.GeneratedConstructorAccessor153.newInstance(Unknown Source) |
---|
2801 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
2802 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
2803 | at java.lang.Class.newInstance0(Class.java:357) |
---|
2804 | at java.lang.Class.newInstance(Class.java:310) |
---|
2805 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
2806 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
2807 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
2808 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
2809 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
2810 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
2811 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
2812 | ... 9 more |
---|
2813 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
2814 | Cannot start the Raw pixels store. |
---|
2815 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
2816 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
2817 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
2818 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
2819 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
2820 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
2821 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
2822 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
2823 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
2824 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
2825 | at java.lang.Thread.run(Thread.java:680) |
---|
2826 | Caused by: omero.MissingPyramidException |
---|
2827 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/278_pyramid |
---|
2828 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
2829 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
2830 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
2831 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
2832 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2833 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2834 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2835 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2836 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2837 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2838 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
2839 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2840 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
2841 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
2842 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2843 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
2844 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2845 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
2846 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2847 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
2848 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2849 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2850 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2851 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2852 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2853 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2854 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2855 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2856 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2857 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
2858 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2859 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
2860 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2861 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2862 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2863 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
2864 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2865 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2866 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
2867 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
2868 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
2869 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
2870 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
2871 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
2872 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2873 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2874 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2875 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2876 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2877 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
2878 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2879 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2880 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
2881 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
2882 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
2883 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
2884 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
2885 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
2886 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
2887 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
2888 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
2889 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
2890 | " |
---|
2891 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
2892 | message = "Missing pyramid:/OMERO/Pixels/278_pyramid" |
---|
2893 | backOff = 713691 |
---|
2894 | pixelsID = 278 |
---|
2895 | at sun.reflect.GeneratedConstructorAccessor153.newInstance(Unknown Source) |
---|
2896 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
2897 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
2898 | at java.lang.Class.newInstance0(Class.java:357) |
---|
2899 | at java.lang.Class.newInstance(Class.java:310) |
---|
2900 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
2901 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
2902 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
2903 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
2904 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
2905 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
2906 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
2907 | ... 9 more |
---|
2908 | Exception in thread "AWT-EventQueue-0" |
---|
2909 | |
---|
2910 | 2013-02-14 11:40:01,800 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
2911 | Cannot start the Raw pixels store. |
---|
2912 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
2913 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
2914 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
2915 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
2916 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
2917 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
2918 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
2919 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
2920 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
2921 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
2922 | at java.lang.Thread.run(Thread.java:680) |
---|
2923 | Caused by: omero.MissingPyramidException |
---|
2924 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/285_pyramid |
---|
2925 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
2926 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
2927 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
2928 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
2929 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2930 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2931 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2932 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2933 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2934 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2935 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
2936 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2937 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
2938 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
2939 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2940 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
2941 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2942 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
2943 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2944 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
2945 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2946 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2947 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2948 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
2949 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2950 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2951 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2952 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2953 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2954 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
2955 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2956 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
2957 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2958 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2959 | at $Proxy94.setPixelsId(Unknown Source) |
---|
2960 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
2961 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2962 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2963 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
2964 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
2965 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
2966 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
2967 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
2968 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
2969 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
2970 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
2971 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
2972 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
2973 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
2974 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
2975 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
2976 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
2977 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
2978 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
2979 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
2980 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
2981 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
2982 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
2983 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
2984 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
2985 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
2986 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
2987 | " |
---|
2988 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
2989 | message = "Missing pyramid:/OMERO/Pixels/285_pyramid" |
---|
2990 | backOff = 269616 |
---|
2991 | pixelsID = 285 |
---|
2992 | at sun.reflect.GeneratedConstructorAccessor153.newInstance(Unknown Source) |
---|
2993 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
2994 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
2995 | at java.lang.Class.newInstance0(Class.java:357) |
---|
2996 | at java.lang.Class.newInstance(Class.java:310) |
---|
2997 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
2998 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
2999 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
3000 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
3001 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
3002 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
3003 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
3004 | ... 9 more |
---|
3005 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3006 | Cannot start the Raw pixels store. |
---|
3007 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3008 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
3009 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
3010 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
3011 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3012 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3013 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3014 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3015 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3016 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3017 | at java.lang.Thread.run(Thread.java:680) |
---|
3018 | Caused by: omero.MissingPyramidException |
---|
3019 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/285_pyramid |
---|
3020 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
3021 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
3022 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
3023 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
3024 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
3025 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
3026 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
3027 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
3028 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
3029 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
3030 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
3031 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
3032 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
3033 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
3034 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
3035 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
3036 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
3037 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
3038 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
3039 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
3040 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
3041 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
3042 | at $Proxy94.setPixelsId(Unknown Source) |
---|
3043 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
3044 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
3045 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
3046 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
3047 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
3048 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
3049 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
3050 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
3051 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
3052 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
3053 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
3054 | at $Proxy94.setPixelsId(Unknown Source) |
---|
3055 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
3056 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
3057 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
3058 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
3059 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
3060 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
3061 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
3062 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
3063 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
3064 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
3065 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
3066 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
3067 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
3068 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
3069 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
3070 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
3071 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
3072 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
3073 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
3074 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
3075 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
3076 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
3077 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
3078 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
3079 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
3080 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
3081 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
3082 | " |
---|
3083 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
3084 | message = "Missing pyramid:/OMERO/Pixels/285_pyramid" |
---|
3085 | backOff = 269616 |
---|
3086 | pixelsID = 285 |
---|
3087 | at sun.reflect.GeneratedConstructorAccessor153.newInstance(Unknown Source) |
---|
3088 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
3089 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
3090 | at java.lang.Class.newInstance0(Class.java:357) |
---|
3091 | at java.lang.Class.newInstance(Class.java:310) |
---|
3092 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
3093 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
3094 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
3095 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
3096 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
3097 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
3098 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
3099 | ... 9 more |
---|
3100 | Exception in thread "AWT-EventQueue-0" |
---|
3101 | |
---|
3102 | 2013-02-14 13:49:12,233 ERROR [py.shoola.env.data.OmeroImageServiceImpl] (hread-4297) Cannot get thumbnail |
---|
3103 | 2013-02-14 13:49:12,602 ERROR [treeviewer.RefreshExperimenterDataLoader] (entQueue-0) State: 11Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3104 | Cannot access the Container service. |
---|
3105 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3106 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPojosService(OMEROGateway.java:1467) |
---|
3107 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2643) |
---|
3108 | at org.openmicroscopy.shoola.env.data.OmeroDataServiceImpl.loadContainerHierarchy(OmeroDataServiceImpl.java:221) |
---|
3109 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader.retrieveData(DMRefreshLoader.java:148) |
---|
3110 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader.access$100(DMRefreshLoader.java:73) |
---|
3111 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader$1.doCall(DMRefreshLoader.java:215) |
---|
3112 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3113 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3114 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3115 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3116 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3117 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3118 | at java.lang.Thread.run(Thread.java:680) |
---|
3119 | Caused by: Ice.ConnectionLostException |
---|
3120 | error = 0 |
---|
3121 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3122 | at omero.api._ServiceFactoryDelM.getContainerService(_ServiceFactoryDelM.java:768) |
---|
3123 | at omero.api.ServiceFactoryPrxHelper.getContainerService(ServiceFactoryPrxHelper.java:840) |
---|
3124 | at omero.api.ServiceFactoryPrxHelper.getContainerService(ServiceFactoryPrxHelper.java:812) |
---|
3125 | at org.openmicroscopy.shoola.env.data.Connector.getPojosService(Connector.java:311) |
---|
3126 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPojosService(OMEROGateway.java:1464) |
---|
3127 | ... 12 more |
---|
3128 | State: 11Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3129 | Cannot access the Container service. |
---|
3130 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3131 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPojosService(OMEROGateway.java:1467) |
---|
3132 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2643) |
---|
3133 | at org.openmicroscopy.shoola.env.data.OmeroDataServiceImpl.loadContainerHierarchy(OmeroDataServiceImpl.java:221) |
---|
3134 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader.retrieveData(DMRefreshLoader.java:148) |
---|
3135 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader.access$100(DMRefreshLoader.java:73) |
---|
3136 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader$1.doCall(DMRefreshLoader.java:215) |
---|
3137 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3138 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3139 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3140 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3141 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3142 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3143 | at java.lang.Thread.run(Thread.java:680) |
---|
3144 | Caused by: Ice.ConnectionLostException |
---|
3145 | error = 0 |
---|
3146 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3147 | at omero.api._ServiceFactoryDelM.getContainerService(_ServiceFactoryDelM.java:768) |
---|
3148 | at omero.api.ServiceFactoryPrxHelper.getContainerService(ServiceFactoryPrxHelper.java:840) |
---|
3149 | at omero.api.ServiceFactoryPrxHelper.getContainerService(ServiceFactoryPrxHelper.java:812) |
---|
3150 | at org.openmicroscopy.shoola.env.data.Connector.getPojosService(Connector.java:311) |
---|
3151 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPojosService(OMEROGateway.java:1464) |
---|
3152 | ... 12 more |
---|
3153 | Exception in thread "AWT-EventQueue-0" |
---|
3154 | |
---|
3155 | 2013-02-14 13:49:12,654 ERROR [ola.agents.metadata.StructuredDataLoader] (entQueue-0) State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3156 | Cannot find annotations for class pojos.DatasetData. |
---|
3157 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3158 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
3159 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
3160 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
3161 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
3162 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
3163 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3164 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3165 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3166 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3167 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3168 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3169 | at java.lang.Thread.run(Thread.java:680) |
---|
3170 | Caused by: Ice.ConnectionLostException |
---|
3171 | error = 0 |
---|
3172 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3173 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
3174 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
3175 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
3176 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
3177 | ... 11 more |
---|
3178 | State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3179 | Cannot find annotations for class pojos.DatasetData. |
---|
3180 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3181 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
3182 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
3183 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
3184 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
3185 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
3186 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3187 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3188 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3189 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3190 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3191 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3192 | at java.lang.Thread.run(Thread.java:680) |
---|
3193 | Caused by: Ice.ConnectionLostException |
---|
3194 | error = 0 |
---|
3195 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3196 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
3197 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
3198 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
3199 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
3200 | ... 11 more |
---|
3201 | Exception in thread "AWT-EventQueue-0" |
---|
3202 | |
---|
3203 | 2013-02-14 13:49:54,129 ERROR [ola.agents.metadata.StructuredDataLoader] (entQueue-0) State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3204 | Cannot find annotations for class pojos.GroupData. |
---|
3205 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3206 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
3207 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
3208 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
3209 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
3210 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
3211 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3212 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3213 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3214 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3215 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3216 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3217 | at java.lang.Thread.run(Thread.java:680) |
---|
3218 | Caused by: Ice.ConnectionLostException |
---|
3219 | error = 0 |
---|
3220 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3221 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
3222 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
3223 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
3224 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
3225 | ... 11 more |
---|
3226 | State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3227 | Cannot find annotations for class pojos.GroupData. |
---|
3228 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3229 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
3230 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
3231 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
3232 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
3233 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
3234 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3235 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3236 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3237 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3238 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3239 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3240 | at java.lang.Thread.run(Thread.java:680) |
---|
3241 | Caused by: Ice.ConnectionLostException |
---|
3242 | error = 0 |
---|
3243 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3244 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
3245 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
3246 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
3247 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
3248 | ... 11 more |
---|
3249 | Exception in thread "AWT-EventQueue-0" |
---|
3250 | |
---|
3251 | 2013-02-14 13:50:15,196 WARN [ ome.system.UpgradeCheck] (nitializer) UPGRADE AVAILABLE:Please upgrade to 4.4.6 See http://trac.openmicroscopy.org.uk/omero for the latest version |
---|
3252 | 2013-02-14 13:50:15,238 INFO [opy.shoola.env.rnd.PixelsServicesFactory] (nitializer) Heap memory usage: max 1060372480 |
---|
3253 | 2013-02-14 13:50:15,244 INFO [enmicroscopy.shoola.env.init.TaskBarInit] (nitializer) Loaded L&F: com.apple.laf.AquaLookAndFeel |
---|
3254 | 2013-02-14 13:50:16,927 INFO [copy.shoola.env.data.DataServicesFactory] (nitializer) Server version: 4.4.4 |
---|
3255 | Client version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
---|
3256 | os_name: Mac OS X |
---|
3257 | os_arch: x86_64 |
---|
3258 | java_version: 1.6.0_39 |
---|
3259 | os_version: 10.6.8 |
---|
3260 | |
---|
3261 | 2013-02-14 13:50:17,006 INFO [y.shoola.env.data.login.LoginServiceImpl] (nitializer) Logged onto OMERO at: gretzky.openmicroscopy.org.uk |
---|
3262 | User Name: user-2 -- Password: *** |
---|
3263 | |
---|
3264 | 2013-02-14 14:01:41,905 ERROR [py.shoola.env.data.OmeroImageServiceImpl] ( Thread-18) Cannot get thumbnail |
---|
3265 | 2013-02-14 14:01:42,335 ERROR [ola.agents.metadata.StructuredDataLoader] (entQueue-0) State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3266 | Cannot find annotations for class pojos.ImageData. |
---|
3267 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3268 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
3269 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
3270 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
3271 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
3272 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
3273 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3274 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3275 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3276 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3277 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3278 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3279 | at java.lang.Thread.run(Thread.java:680) |
---|
3280 | Caused by: Ice.ConnectionLostException |
---|
3281 | error = 0 |
---|
3282 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3283 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
3284 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
3285 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
3286 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
3287 | ... 11 more |
---|
3288 | State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3289 | Cannot find annotations for class pojos.ImageData. |
---|
3290 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3291 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
3292 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
3293 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
3294 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
3295 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
3296 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3297 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3298 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3299 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3300 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3301 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3302 | at java.lang.Thread.run(Thread.java:680) |
---|
3303 | Caused by: Ice.ConnectionLostException |
---|
3304 | error = 0 |
---|
3305 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3306 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
3307 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
3308 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
3309 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
3310 | ... 11 more |
---|
3311 | Exception in thread "AWT-EventQueue-0" |
---|
3312 | |
---|
3313 | 2013-02-14 14:01:42,373 ERROR [py.shoola.env.data.OmeroImageServiceImpl] ( Thread-32) Cannot get thumbnail |
---|
3314 | 2013-02-14 14:01:42,475 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3315 | Cannot start the Raw pixels store. |
---|
3316 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3317 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
3318 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
3319 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
3320 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3321 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3322 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3323 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3324 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3325 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3326 | at java.lang.Thread.run(Thread.java:680) |
---|
3327 | Caused by: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3328 | Cannot access the RawPixelsStore service. |
---|
3329 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3330 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1797) |
---|
3331 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8226) |
---|
3332 | ... 9 more |
---|
3333 | Caused by: Ice.ConnectionLostException |
---|
3334 | error = 0 |
---|
3335 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3336 | at omero.api._ServiceFactoryDelM.createRawPixelsStore(_ServiceFactoryDelM.java:412) |
---|
3337 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:479) |
---|
3338 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:451) |
---|
3339 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsStore(Connector.java:516) |
---|
3340 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1794) |
---|
3341 | ... 10 more |
---|
3342 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3343 | Cannot start the Raw pixels store. |
---|
3344 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3345 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
3346 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
3347 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
3348 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3349 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3350 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3351 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3352 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3353 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3354 | at java.lang.Thread.run(Thread.java:680) |
---|
3355 | Caused by: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3356 | Cannot access the RawPixelsStore service. |
---|
3357 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3358 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1797) |
---|
3359 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8226) |
---|
3360 | ... 9 more |
---|
3361 | Caused by: Ice.ConnectionLostException |
---|
3362 | error = 0 |
---|
3363 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3364 | at omero.api._ServiceFactoryDelM.createRawPixelsStore(_ServiceFactoryDelM.java:412) |
---|
3365 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:479) |
---|
3366 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:451) |
---|
3367 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsStore(Connector.java:516) |
---|
3368 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1794) |
---|
3369 | ... 10 more |
---|
3370 | Exception in thread "AWT-EventQueue-0" |
---|
3371 | |
---|
3372 | 2013-02-14 14:01:42,487 ERROR [shoola.agents.metadata.EnumerationLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3373 | Cannot access the Pixels service. |
---|
3374 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3375 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
3376 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
3377 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
3378 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$1.doCall(EnumerationLoader.java:85) |
---|
3379 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3380 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3381 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3382 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3383 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3384 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3385 | at java.lang.Thread.run(Thread.java:680) |
---|
3386 | Caused by: Ice.ConnectionLostException |
---|
3387 | error = 0 |
---|
3388 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3389 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
3390 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
3391 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
3392 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
3393 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
3394 | ... 10 more |
---|
3395 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3396 | Cannot access the Pixels service. |
---|
3397 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3398 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
3399 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
3400 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
3401 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$1.doCall(EnumerationLoader.java:85) |
---|
3402 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3403 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3404 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3405 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3406 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3407 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3408 | at java.lang.Thread.run(Thread.java:680) |
---|
3409 | Caused by: Ice.ConnectionLostException |
---|
3410 | error = 0 |
---|
3411 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3412 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
3413 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
3414 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
3415 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
3416 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
3417 | ... 10 more |
---|
3418 | Exception in thread "AWT-EventQueue-0" |
---|
3419 | |
---|
3420 | 2013-02-14 14:01:42,517 ERROR [py.shoola.env.data.OmeroImageServiceImpl] ( Thread-19) Cannot get thumbnail |
---|
3421 | 2013-02-14 14:01:42,532 ERROR [shoola.agents.metadata.EnumerationLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3422 | Cannot access the Pixels service. |
---|
3423 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3424 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
3425 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
3426 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
3427 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:113) |
---|
3428 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3429 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3430 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3431 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3432 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3433 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3434 | at java.lang.Thread.run(Thread.java:680) |
---|
3435 | Caused by: Ice.ConnectionLostException |
---|
3436 | error = 0 |
---|
3437 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3438 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
3439 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
3440 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
3441 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
3442 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
3443 | ... 10 more |
---|
3444 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3445 | Cannot access the Pixels service. |
---|
3446 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3447 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
3448 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
3449 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
3450 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:113) |
---|
3451 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3452 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3453 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3454 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3455 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3456 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3457 | at java.lang.Thread.run(Thread.java:680) |
---|
3458 | Caused by: Ice.ConnectionLostException |
---|
3459 | error = 0 |
---|
3460 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3461 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
3462 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
3463 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
3464 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
3465 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
3466 | ... 10 more |
---|
3467 | Exception in thread "AWT-EventQueue-0" |
---|
3468 | |
---|
3469 | 2013-02-14 14:01:42,602 ERROR [ola.agents.metadata.StructuredDataLoader] (entQueue-0) State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3470 | Cannot find annotations for class pojos.DatasetData. |
---|
3471 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3472 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
3473 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
3474 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
3475 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
3476 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
3477 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3478 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3479 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3480 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3481 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3482 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3483 | at java.lang.Thread.run(Thread.java:680) |
---|
3484 | Caused by: Ice.ConnectionLostException |
---|
3485 | error = 0 |
---|
3486 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3487 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
3488 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
3489 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
3490 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
3491 | ... 11 more |
---|
3492 | State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3493 | Cannot find annotations for class pojos.DatasetData. |
---|
3494 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3495 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
3496 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
3497 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
3498 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
3499 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
3500 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3501 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3502 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3503 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3504 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3505 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3506 | at java.lang.Thread.run(Thread.java:680) |
---|
3507 | Caused by: Ice.ConnectionLostException |
---|
3508 | error = 0 |
---|
3509 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3510 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
3511 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
3512 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
3513 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
3514 | ... 11 more |
---|
3515 | Exception in thread "AWT-EventQueue-0" |
---|
3516 | |
---|
3517 | 2013-02-14 14:01:42,670 ERROR [treeviewer.RefreshExperimenterDataLoader] (entQueue-0) State: 11Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3518 | Cannot load hierarchy for class pojos.ProjectData. |
---|
3519 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3520 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2649) |
---|
3521 | at org.openmicroscopy.shoola.env.data.OmeroDataServiceImpl.loadContainerHierarchy(OmeroDataServiceImpl.java:221) |
---|
3522 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader.retrieveData(DMRefreshLoader.java:148) |
---|
3523 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader.access$100(DMRefreshLoader.java:73) |
---|
3524 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader$1.doCall(DMRefreshLoader.java:215) |
---|
3525 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3526 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3527 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3528 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3529 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3530 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3531 | at java.lang.Thread.run(Thread.java:680) |
---|
3532 | Caused by: Ice.ConnectionLostException |
---|
3533 | error = 0 |
---|
3534 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3535 | at omero.api._IContainerDelM.loadContainerHierarchy(_IContainerDelM.java:585) |
---|
3536 | at omero.api.IContainerPrxHelper.loadContainerHierarchy(IContainerPrxHelper.java:738) |
---|
3537 | at omero.api.IContainerPrxHelper.loadContainerHierarchy(IContainerPrxHelper.java:710) |
---|
3538 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2645) |
---|
3539 | ... 11 more |
---|
3540 | State: 11Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3541 | Cannot load hierarchy for class pojos.ProjectData. |
---|
3542 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3543 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2649) |
---|
3544 | at org.openmicroscopy.shoola.env.data.OmeroDataServiceImpl.loadContainerHierarchy(OmeroDataServiceImpl.java:221) |
---|
3545 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader.retrieveData(DMRefreshLoader.java:148) |
---|
3546 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader.access$100(DMRefreshLoader.java:73) |
---|
3547 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader$1.doCall(DMRefreshLoader.java:215) |
---|
3548 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3549 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3550 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3551 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3552 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3553 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3554 | at java.lang.Thread.run(Thread.java:680) |
---|
3555 | Caused by: Ice.ConnectionLostException |
---|
3556 | error = 0 |
---|
3557 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3558 | at omero.api._IContainerDelM.loadContainerHierarchy(_IContainerDelM.java:585) |
---|
3559 | at omero.api.IContainerPrxHelper.loadContainerHierarchy(IContainerPrxHelper.java:738) |
---|
3560 | at omero.api.IContainerPrxHelper.loadContainerHierarchy(IContainerPrxHelper.java:710) |
---|
3561 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2645) |
---|
3562 | ... 11 more |
---|
3563 | Exception in thread "AWT-EventQueue-0" |
---|
3564 | |
---|
3565 | 2013-02-14 14:01:42,719 ERROR [oola.agents.treeviewer.ScreenPlateLoader] (entQueue-0) State: 11Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3566 | Cannot load hierarchy for class pojos.ScreenData. |
---|
3567 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3568 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2649) |
---|
3569 | at org.openmicroscopy.shoola.env.data.OmeroDataServiceImpl.loadContainerHierarchy(OmeroDataServiceImpl.java:221) |
---|
3570 | at org.openmicroscopy.shoola.env.data.views.calls.DMLoader$1.doCall(DMLoader.java:91) |
---|
3571 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3572 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3573 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3574 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3575 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3576 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3577 | at java.lang.Thread.run(Thread.java:680) |
---|
3578 | Caused by: Ice.ConnectionLostException |
---|
3579 | error = 0 |
---|
3580 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3581 | at omero.api._IContainerDelM.loadContainerHierarchy(_IContainerDelM.java:585) |
---|
3582 | at omero.api.IContainerPrxHelper.loadContainerHierarchy(IContainerPrxHelper.java:738) |
---|
3583 | at omero.api.IContainerPrxHelper.loadContainerHierarchy(IContainerPrxHelper.java:710) |
---|
3584 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2645) |
---|
3585 | ... 9 more |
---|
3586 | State: 11Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3587 | Cannot load hierarchy for class pojos.ScreenData. |
---|
3588 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3589 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2649) |
---|
3590 | at org.openmicroscopy.shoola.env.data.OmeroDataServiceImpl.loadContainerHierarchy(OmeroDataServiceImpl.java:221) |
---|
3591 | at org.openmicroscopy.shoola.env.data.views.calls.DMLoader$1.doCall(DMLoader.java:91) |
---|
3592 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3593 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3594 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3595 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3596 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3597 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3598 | at java.lang.Thread.run(Thread.java:680) |
---|
3599 | Caused by: Ice.ConnectionLostException |
---|
3600 | error = 0 |
---|
3601 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3602 | at omero.api._IContainerDelM.loadContainerHierarchy(_IContainerDelM.java:585) |
---|
3603 | at omero.api.IContainerPrxHelper.loadContainerHierarchy(IContainerPrxHelper.java:738) |
---|
3604 | at omero.api.IContainerPrxHelper.loadContainerHierarchy(IContainerPrxHelper.java:710) |
---|
3605 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2645) |
---|
3606 | ... 9 more |
---|
3607 | Exception in thread "AWT-EventQueue-0" |
---|
3608 | |
---|
3609 | 2013-02-14 14:01:42,777 ERROR [ola.agents.metadata.StructuredDataLoader] (entQueue-0) State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3610 | Cannot find annotations for class pojos.ImageData. |
---|
3611 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3612 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
3613 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
3614 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
3615 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
3616 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
3617 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3618 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3619 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3620 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3621 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3622 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3623 | at java.lang.Thread.run(Thread.java:680) |
---|
3624 | Caused by: Ice.ConnectionLostException |
---|
3625 | error = 0 |
---|
3626 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3627 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
3628 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
3629 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
3630 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
3631 | ... 11 more |
---|
3632 | State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3633 | Cannot find annotations for class pojos.ImageData. |
---|
3634 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3635 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
3636 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
3637 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
3638 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
3639 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
3640 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3641 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3642 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3643 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3644 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3645 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3646 | at java.lang.Thread.run(Thread.java:680) |
---|
3647 | Caused by: Ice.ConnectionLostException |
---|
3648 | error = 0 |
---|
3649 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3650 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
3651 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
3652 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
3653 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
3654 | ... 11 more |
---|
3655 | Exception in thread "AWT-EventQueue-0" |
---|
3656 | |
---|
3657 | 2013-02-14 14:01:42,827 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3658 | Cannot start the Raw pixels store. |
---|
3659 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3660 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
3661 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
3662 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
3663 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3664 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3665 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3666 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3667 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3668 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3669 | at java.lang.Thread.run(Thread.java:680) |
---|
3670 | Caused by: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3671 | Cannot access the RawPixelsStore service. |
---|
3672 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3673 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1797) |
---|
3674 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8226) |
---|
3675 | ... 9 more |
---|
3676 | Caused by: Ice.ConnectionLostException |
---|
3677 | error = 0 |
---|
3678 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3679 | at omero.api._ServiceFactoryDelM.createRawPixelsStore(_ServiceFactoryDelM.java:412) |
---|
3680 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:479) |
---|
3681 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:451) |
---|
3682 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsStore(Connector.java:516) |
---|
3683 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1794) |
---|
3684 | ... 10 more |
---|
3685 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3686 | Cannot start the Raw pixels store. |
---|
3687 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3688 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
3689 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
3690 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
3691 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3692 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3693 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3694 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3695 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3696 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3697 | at java.lang.Thread.run(Thread.java:680) |
---|
3698 | Caused by: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3699 | Cannot access the RawPixelsStore service. |
---|
3700 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3701 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1797) |
---|
3702 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8226) |
---|
3703 | ... 9 more |
---|
3704 | Caused by: Ice.ConnectionLostException |
---|
3705 | error = 0 |
---|
3706 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3707 | at omero.api._ServiceFactoryDelM.createRawPixelsStore(_ServiceFactoryDelM.java:412) |
---|
3708 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:479) |
---|
3709 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:451) |
---|
3710 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsStore(Connector.java:516) |
---|
3711 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1794) |
---|
3712 | ... 10 more |
---|
3713 | Exception in thread "AWT-EventQueue-0" |
---|
3714 | |
---|
3715 | 2013-02-14 14:01:42,846 ERROR [shoola.agents.metadata.EnumerationLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3716 | Cannot access the Pixels service. |
---|
3717 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3718 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
3719 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
3720 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
3721 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$1.doCall(EnumerationLoader.java:85) |
---|
3722 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3723 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3724 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3725 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3726 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3727 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3728 | at java.lang.Thread.run(Thread.java:680) |
---|
3729 | Caused by: Ice.ConnectionLostException |
---|
3730 | error = 0 |
---|
3731 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3732 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
3733 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
3734 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
3735 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
3736 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
3737 | ... 10 more |
---|
3738 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3739 | Cannot access the Pixels service. |
---|
3740 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3741 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
3742 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
3743 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
3744 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$1.doCall(EnumerationLoader.java:85) |
---|
3745 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3746 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3747 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3748 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3749 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3750 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3751 | at java.lang.Thread.run(Thread.java:680) |
---|
3752 | Caused by: Ice.ConnectionLostException |
---|
3753 | error = 0 |
---|
3754 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3755 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
3756 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
3757 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
3758 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
3759 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
3760 | ... 10 more |
---|
3761 | Exception in thread "AWT-EventQueue-0" |
---|
3762 | |
---|
3763 | 2013-02-14 14:01:42,892 ERROR [shoola.agents.metadata.EnumerationLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3764 | Cannot access the Pixels service. |
---|
3765 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3766 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
3767 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
3768 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
3769 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:113) |
---|
3770 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3771 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3772 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3773 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3774 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3775 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3776 | at java.lang.Thread.run(Thread.java:680) |
---|
3777 | Caused by: Ice.ConnectionLostException |
---|
3778 | error = 0 |
---|
3779 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3780 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
3781 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
3782 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
3783 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
3784 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
3785 | ... 10 more |
---|
3786 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3787 | Cannot access the Pixels service. |
---|
3788 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3789 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
3790 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
3791 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
3792 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:113) |
---|
3793 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3794 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3795 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3796 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3797 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3798 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3799 | at java.lang.Thread.run(Thread.java:680) |
---|
3800 | Caused by: Ice.ConnectionLostException |
---|
3801 | error = 0 |
---|
3802 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3803 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
3804 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
3805 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
3806 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
3807 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
3808 | ... 10 more |
---|
3809 | Exception in thread "AWT-EventQueue-0" |
---|
3810 | |
---|
3811 | 2013-02-14 14:01:42,949 ERROR [ola.agents.metadata.StructuredDataLoader] (entQueue-0) State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3812 | Cannot find annotations for class pojos.ImageData. |
---|
3813 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3814 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
3815 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
3816 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
3817 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
3818 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
3819 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3820 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3821 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3822 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3823 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3824 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3825 | at java.lang.Thread.run(Thread.java:680) |
---|
3826 | Caused by: Ice.ConnectionLostException |
---|
3827 | error = 0 |
---|
3828 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3829 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
3830 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
3831 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
3832 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
3833 | ... 11 more |
---|
3834 | State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3835 | Cannot find annotations for class pojos.ImageData. |
---|
3836 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3837 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
3838 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
3839 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
3840 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
3841 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
3842 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3843 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3844 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3845 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3846 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3847 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3848 | at java.lang.Thread.run(Thread.java:680) |
---|
3849 | Caused by: Ice.ConnectionLostException |
---|
3850 | error = 0 |
---|
3851 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3852 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
3853 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
3854 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
3855 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
3856 | ... 11 more |
---|
3857 | Exception in thread "AWT-EventQueue-0" |
---|
3858 | |
---|
3859 | 2013-02-14 14:01:42,990 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3860 | Cannot start the Raw pixels store. |
---|
3861 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3862 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
3863 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
3864 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
3865 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3866 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3867 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3868 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3869 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3870 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3871 | at java.lang.Thread.run(Thread.java:680) |
---|
3872 | Caused by: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3873 | Cannot access the RawPixelsStore service. |
---|
3874 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3875 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1797) |
---|
3876 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8226) |
---|
3877 | ... 9 more |
---|
3878 | Caused by: Ice.ConnectionLostException |
---|
3879 | error = 0 |
---|
3880 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3881 | at omero.api._ServiceFactoryDelM.createRawPixelsStore(_ServiceFactoryDelM.java:412) |
---|
3882 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:479) |
---|
3883 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:451) |
---|
3884 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsStore(Connector.java:516) |
---|
3885 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1794) |
---|
3886 | ... 10 more |
---|
3887 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3888 | Cannot start the Raw pixels store. |
---|
3889 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3890 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
3891 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
3892 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
3893 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3894 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3895 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3896 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3897 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3898 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3899 | at java.lang.Thread.run(Thread.java:680) |
---|
3900 | Caused by: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3901 | Cannot access the RawPixelsStore service. |
---|
3902 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3903 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1797) |
---|
3904 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8226) |
---|
3905 | ... 9 more |
---|
3906 | Caused by: Ice.ConnectionLostException |
---|
3907 | error = 0 |
---|
3908 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3909 | at omero.api._ServiceFactoryDelM.createRawPixelsStore(_ServiceFactoryDelM.java:412) |
---|
3910 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:479) |
---|
3911 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:451) |
---|
3912 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsStore(Connector.java:516) |
---|
3913 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1794) |
---|
3914 | ... 10 more |
---|
3915 | Exception in thread "AWT-EventQueue-0" |
---|
3916 | |
---|
3917 | 2013-02-14 14:01:42,991 ERROR [shoola.agents.metadata.EnumerationLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3918 | Cannot access the Pixels service. |
---|
3919 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3920 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
3921 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
3922 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
3923 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$1.doCall(EnumerationLoader.java:85) |
---|
3924 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3925 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3926 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3927 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3928 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3929 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3930 | at java.lang.Thread.run(Thread.java:680) |
---|
3931 | Caused by: Ice.ConnectionLostException |
---|
3932 | error = 0 |
---|
3933 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3934 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
3935 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
3936 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
3937 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
3938 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
3939 | ... 10 more |
---|
3940 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3941 | Cannot access the Pixels service. |
---|
3942 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3943 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
3944 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
3945 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
3946 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$1.doCall(EnumerationLoader.java:85) |
---|
3947 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3948 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3949 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3950 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3951 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3952 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3953 | at java.lang.Thread.run(Thread.java:680) |
---|
3954 | Caused by: Ice.ConnectionLostException |
---|
3955 | error = 0 |
---|
3956 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3957 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
3958 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
3959 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
3960 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
3961 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
3962 | ... 10 more |
---|
3963 | Exception in thread "AWT-EventQueue-0" |
---|
3964 | |
---|
3965 | 2013-02-14 14:01:43,062 ERROR [shoola.agents.metadata.EnumerationLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3966 | Cannot access the Pixels service. |
---|
3967 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3968 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
3969 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
3970 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
3971 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:113) |
---|
3972 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3973 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3974 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3975 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3976 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
3977 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
3978 | at java.lang.Thread.run(Thread.java:680) |
---|
3979 | Caused by: Ice.ConnectionLostException |
---|
3980 | error = 0 |
---|
3981 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
3982 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
3983 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
3984 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
3985 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
3986 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
3987 | ... 10 more |
---|
3988 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
3989 | Cannot access the Pixels service. |
---|
3990 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
3991 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
3992 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
3993 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
3994 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:113) |
---|
3995 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
3996 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
3997 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
3998 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
3999 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4000 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4001 | at java.lang.Thread.run(Thread.java:680) |
---|
4002 | Caused by: Ice.ConnectionLostException |
---|
4003 | error = 0 |
---|
4004 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4005 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
4006 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
4007 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
4008 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
4009 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
4010 | ... 10 more |
---|
4011 | Exception in thread "AWT-EventQueue-0" |
---|
4012 | |
---|
4013 | 2013-02-14 14:04:21,475 ERROR [treeviewer.RefreshExperimenterDataLoader] (entQueue-0) State: 11Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4014 | Cannot load hierarchy for class pojos.ProjectData. |
---|
4015 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4016 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2649) |
---|
4017 | at org.openmicroscopy.shoola.env.data.OmeroDataServiceImpl.loadContainerHierarchy(OmeroDataServiceImpl.java:221) |
---|
4018 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader.retrieveData(DMRefreshLoader.java:148) |
---|
4019 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader.access$100(DMRefreshLoader.java:73) |
---|
4020 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader$1.doCall(DMRefreshLoader.java:215) |
---|
4021 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4022 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4023 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4024 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4025 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4026 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4027 | at java.lang.Thread.run(Thread.java:680) |
---|
4028 | Caused by: Ice.ConnectionLostException |
---|
4029 | error = 0 |
---|
4030 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4031 | at omero.api._IContainerDelM.loadContainerHierarchy(_IContainerDelM.java:585) |
---|
4032 | at omero.api.IContainerPrxHelper.loadContainerHierarchy(IContainerPrxHelper.java:738) |
---|
4033 | at omero.api.IContainerPrxHelper.loadContainerHierarchy(IContainerPrxHelper.java:710) |
---|
4034 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2645) |
---|
4035 | ... 11 more |
---|
4036 | State: 11Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4037 | Cannot load hierarchy for class pojos.ProjectData. |
---|
4038 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4039 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2649) |
---|
4040 | at org.openmicroscopy.shoola.env.data.OmeroDataServiceImpl.loadContainerHierarchy(OmeroDataServiceImpl.java:221) |
---|
4041 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader.retrieveData(DMRefreshLoader.java:148) |
---|
4042 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader.access$100(DMRefreshLoader.java:73) |
---|
4043 | at org.openmicroscopy.shoola.env.data.views.calls.DMRefreshLoader$1.doCall(DMRefreshLoader.java:215) |
---|
4044 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4045 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4046 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4047 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4048 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4049 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4050 | at java.lang.Thread.run(Thread.java:680) |
---|
4051 | Caused by: Ice.ConnectionLostException |
---|
4052 | error = 0 |
---|
4053 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4054 | at omero.api._IContainerDelM.loadContainerHierarchy(_IContainerDelM.java:585) |
---|
4055 | at omero.api.IContainerPrxHelper.loadContainerHierarchy(IContainerPrxHelper.java:738) |
---|
4056 | at omero.api.IContainerPrxHelper.loadContainerHierarchy(IContainerPrxHelper.java:710) |
---|
4057 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadContainerHierarchy(OMEROGateway.java:2645) |
---|
4058 | ... 11 more |
---|
4059 | Exception in thread "AWT-EventQueue-0" |
---|
4060 | |
---|
4061 | 2013-02-14 14:06:53,278 ERROR [shoola.agents.metadata.EnumerationLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4062 | Cannot access the Pixels service. |
---|
4063 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4064 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
4065 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
4066 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
4067 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:113) |
---|
4068 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4069 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4070 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4071 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4072 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4073 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4074 | at java.lang.Thread.run(Thread.java:680) |
---|
4075 | Caused by: Ice.ConnectionLostException |
---|
4076 | error = 0 |
---|
4077 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4078 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
4079 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
4080 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
4081 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
4082 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
4083 | ... 10 more |
---|
4084 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4085 | Cannot access the Pixels service. |
---|
4086 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4087 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
4088 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
4089 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
4090 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$2.doCall(EnumerationLoader.java:113) |
---|
4091 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4092 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4093 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4094 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4095 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4096 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4097 | at java.lang.Thread.run(Thread.java:680) |
---|
4098 | Caused by: Ice.ConnectionLostException |
---|
4099 | error = 0 |
---|
4100 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4101 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
4102 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
4103 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
4104 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
4105 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
4106 | ... 10 more |
---|
4107 | Exception in thread "AWT-EventQueue-0" |
---|
4108 | |
---|
4109 | 2013-02-14 14:06:53,290 ERROR [py.shoola.env.data.OmeroImageServiceImpl] ( Thread-42) Cannot get thumbnail |
---|
4110 | 2013-02-14 14:06:53,362 ERROR [ola.agents.metadata.StructuredDataLoader] (entQueue-0) State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4111 | Cannot find annotations for class pojos.ImageData. |
---|
4112 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4113 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
4114 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
4115 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
4116 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
4117 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
4118 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4119 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4120 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4121 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4122 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4123 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4124 | at java.lang.Thread.run(Thread.java:680) |
---|
4125 | Caused by: Ice.ConnectionLostException |
---|
4126 | error = 0 |
---|
4127 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4128 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
4129 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
4130 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
4131 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
4132 | ... 11 more |
---|
4133 | State: 2Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4134 | Cannot find annotations for class pojos.ImageData. |
---|
4135 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4136 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2745) |
---|
4137 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1046) |
---|
4138 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:731) |
---|
4139 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835) |
---|
4140 | at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211) |
---|
4141 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4142 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4143 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4144 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4145 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4146 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4147 | at java.lang.Thread.run(Thread.java:680) |
---|
4148 | Caused by: Ice.ConnectionLostException |
---|
4149 | error = 0 |
---|
4150 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4151 | at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260) |
---|
4152 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320) |
---|
4153 | at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292) |
---|
4154 | at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2741) |
---|
4155 | ... 11 more |
---|
4156 | Exception in thread "AWT-EventQueue-0" |
---|
4157 | |
---|
4158 | 2013-02-14 14:06:53,383 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4159 | Cannot start the Raw pixels store. |
---|
4160 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4161 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
4162 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
4163 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
4164 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4165 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4166 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4167 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4168 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4169 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4170 | at java.lang.Thread.run(Thread.java:680) |
---|
4171 | Caused by: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4172 | Cannot access the RawPixelsStore service. |
---|
4173 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4174 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1797) |
---|
4175 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8226) |
---|
4176 | ... 9 more |
---|
4177 | Caused by: Ice.ConnectionLostException |
---|
4178 | error = 0 |
---|
4179 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4180 | at omero.api._ServiceFactoryDelM.createRawPixelsStore(_ServiceFactoryDelM.java:412) |
---|
4181 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:479) |
---|
4182 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:451) |
---|
4183 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsStore(Connector.java:516) |
---|
4184 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1794) |
---|
4185 | ... 10 more |
---|
4186 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4187 | Cannot start the Raw pixels store. |
---|
4188 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4189 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
4190 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
4191 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
4192 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4193 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4194 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4195 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4196 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4197 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4198 | at java.lang.Thread.run(Thread.java:680) |
---|
4199 | Caused by: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4200 | Cannot access the RawPixelsStore service. |
---|
4201 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4202 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1797) |
---|
4203 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8226) |
---|
4204 | ... 9 more |
---|
4205 | Caused by: Ice.ConnectionLostException |
---|
4206 | error = 0 |
---|
4207 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4208 | at omero.api._ServiceFactoryDelM.createRawPixelsStore(_ServiceFactoryDelM.java:412) |
---|
4209 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:479) |
---|
4210 | at omero.api.ServiceFactoryPrxHelper.createRawPixelsStore(ServiceFactoryPrxHelper.java:451) |
---|
4211 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsStore(Connector.java:516) |
---|
4212 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsStore(OMEROGateway.java:1794) |
---|
4213 | ... 10 more |
---|
4214 | Exception in thread "AWT-EventQueue-0" |
---|
4215 | |
---|
4216 | 2013-02-14 14:06:53,424 ERROR [shoola.agents.metadata.EnumerationLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4217 | Cannot access the Pixels service. |
---|
4218 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4219 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
4220 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
4221 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
4222 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$1.doCall(EnumerationLoader.java:85) |
---|
4223 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4224 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4225 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4226 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4227 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4228 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4229 | at java.lang.Thread.run(Thread.java:680) |
---|
4230 | Caused by: Ice.ConnectionLostException |
---|
4231 | error = 0 |
---|
4232 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4233 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
4234 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
4235 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
4236 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
4237 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
4238 | ... 10 more |
---|
4239 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4240 | Cannot access the Pixels service. |
---|
4241 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4242 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1827) |
---|
4243 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getEnumerations(OMEROGateway.java:5958) |
---|
4244 | at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.getEnumeration(OmeroMetadataServiceImpl.java:1749) |
---|
4245 | at org.openmicroscopy.shoola.env.data.views.calls.EnumerationLoader$1.doCall(EnumerationLoader.java:85) |
---|
4246 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4247 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4248 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4249 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4250 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4251 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4252 | at java.lang.Thread.run(Thread.java:680) |
---|
4253 | Caused by: Ice.ConnectionLostException |
---|
4254 | error = 0 |
---|
4255 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4256 | at omero.api._ServiceFactoryDelM.getPixelsService(_ServiceFactoryDelM.java:944) |
---|
4257 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:1020) |
---|
4258 | at omero.api.ServiceFactoryPrxHelper.getPixelsService(ServiceFactoryPrxHelper.java:992) |
---|
4259 | at org.openmicroscopy.shoola.env.data.Connector.getPixelsService(Connector.java:531) |
---|
4260 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getPixelsService(OMEROGateway.java:1824) |
---|
4261 | ... 10 more |
---|
4262 | Exception in thread "AWT-EventQueue-0" |
---|
4263 | |
---|
4264 | 2013-02-14 14:07:03,315 ERROR [nmicroscopy.shoola.env.ui.TaskBarManager] (entQueue-0) org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4265 | Cannot access the Admin service. |
---|
4266 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4267 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getAdminService(OMEROGateway.java:1617) |
---|
4268 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getUserDetails(OMEROGateway.java:2261) |
---|
4269 | at org.openmicroscopy.shoola.env.data.AdminServiceImpl.changeExperimenterGroup(AdminServiceImpl.java:230) |
---|
4270 | at org.openmicroscopy.shoola.env.ui.TaskBarManager.exitApplication(TaskBarManager.java:631) |
---|
4271 | at org.openmicroscopy.shoola.env.ui.TaskBarManager.doExit(TaskBarManager.java:572) |
---|
4272 | at org.openmicroscopy.shoola.env.ui.TaskBarManager.eventFired(TaskBarManager.java:1006) |
---|
4273 | at org.openmicroscopy.shoola.env.event.EventBusImpl.dispatch(EventBusImpl.java:91) |
---|
4274 | at org.openmicroscopy.shoola.env.event.EventBusImpl.post(EventBusImpl.java:222) |
---|
4275 | at org.openmicroscopy.shoola.agents.treeviewer.actions.ExitApplicationAction.actionPerformed(ExitApplicationAction.java:112) |
---|
4276 | at org.openmicroscopy.shoola.agents.treeviewer.view.TreeViewerControl.propertyChange(TreeViewerControl.java:1474) |
---|
4277 | at java.beans.PropertyChangeSupport.firePropertyChange(PropertyChangeSupport.java:339) |
---|
4278 | at java.beans.PropertyChangeSupport.firePropertyChange(PropertyChangeSupport.java:276) |
---|
4279 | at java.awt.Component.firePropertyChange(Component.java:8255) |
---|
4280 | at java.awt.Component.firePropertyChange(Component.java:8368) |
---|
4281 | at org.openmicroscopy.shoola.util.ui.MacOSMenuHandler.quit(MacOSMenuHandler.java:105) |
---|
4282 | at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) |
---|
4283 | at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) |
---|
4284 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4285 | at java.lang.reflect.Method.invoke(Method.java:597) |
---|
4286 | at org.openmicroscopy.shoola.util.ui.OSMenuAdapter.callTarget(OSMenuAdapter.java:165) |
---|
4287 | at org.openmicroscopy.shoola.util.ui.OSMenuAdapter.invoke(OSMenuAdapter.java:216) |
---|
4288 | at sun.proxy.$Proxy0.handleQuit(Unknown Source) |
---|
4289 | at com.apple.eawt._AppEventLegacyHandler$7.dispatchEvent(_AppEventLegacyHandler.java:146) |
---|
4290 | at com.apple.eawt._AppEventLegacyHandler.sendEventToEachListenerUntilHandled(_AppEventLegacyHandler.java:168) |
---|
4291 | at com.apple.eawt._AppEventLegacyHandler.handleQuitRequestWith(_AppEventLegacyHandler.java:144) |
---|
4292 | at com.apple.eawt._AppEventHandler$_QuitDispatcher.performUsing(_AppEventHandler.java:387) |
---|
4293 | at com.apple.eawt._AppEventHandler$_QuitDispatcher.performUsing(_AppEventHandler.java:380) |
---|
4294 | at com.apple.eawt._AppEventHandler$_AppEventDispatcher$1.run(_AppEventHandler.java:489) |
---|
4295 | at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209) |
---|
4296 | at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:708) |
---|
4297 | at java.awt.EventQueue.access$400(EventQueue.java:82) |
---|
4298 | at java.awt.EventQueue$2.run(EventQueue.java:669) |
---|
4299 | at java.awt.EventQueue$2.run(EventQueue.java:667) |
---|
4300 | at java.security.AccessController.doPrivileged(Native Method) |
---|
4301 | at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) |
---|
4302 | at java.awt.EventQueue.dispatchEvent(EventQueue.java:678) |
---|
4303 | at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296) |
---|
4304 | at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211) |
---|
4305 | at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201) |
---|
4306 | at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196) |
---|
4307 | at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188) |
---|
4308 | at java.awt.EventDispatchThread.run(EventDispatchThread.java:122) |
---|
4309 | Caused by: Ice.ConnectionLostException |
---|
4310 | error = 0 |
---|
4311 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4312 | at omero.api._ServiceFactoryDelM.getAdminService(_ServiceFactoryDelM.java:627) |
---|
4313 | at omero.api.ServiceFactoryPrxHelper.getAdminService(ServiceFactoryPrxHelper.java:705) |
---|
4314 | at omero.api.ServiceFactoryPrxHelper.getAdminService(ServiceFactoryPrxHelper.java:677) |
---|
4315 | at org.openmicroscopy.shoola.env.data.Connector.getAdminService(Connector.java:588) |
---|
4316 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getAdminService(OMEROGateway.java:1614) |
---|
4317 | ... 41 more |
---|
4318 | org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4319 | Cannot access the Admin service. |
---|
4320 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4321 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getAdminService(OMEROGateway.java:1617) |
---|
4322 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getUserDetails(OMEROGateway.java:2261) |
---|
4323 | at org.openmicroscopy.shoola.env.data.AdminServiceImpl.changeExperimenterGroup(AdminServiceImpl.java:230) |
---|
4324 | at org.openmicroscopy.shoola.env.ui.TaskBarManager.exitApplication(TaskBarManager.java:631) |
---|
4325 | at org.openmicroscopy.shoola.env.ui.TaskBarManager.doExit(TaskBarManager.java:572) |
---|
4326 | at org.openmicroscopy.shoola.env.ui.TaskBarManager.eventFired(TaskBarManager.java:1006) |
---|
4327 | at org.openmicroscopy.shoola.env.event.EventBusImpl.dispatch(EventBusImpl.java:91) |
---|
4328 | at org.openmicroscopy.shoola.env.event.EventBusImpl.post(EventBusImpl.java:222) |
---|
4329 | at org.openmicroscopy.shoola.agents.treeviewer.actions.ExitApplicationAction.actionPerformed(ExitApplicationAction.java:112) |
---|
4330 | at org.openmicroscopy.shoola.agents.treeviewer.view.TreeViewerControl.propertyChange(TreeViewerControl.java:1474) |
---|
4331 | at java.beans.PropertyChangeSupport.firePropertyChange(PropertyChangeSupport.java:339) |
---|
4332 | at java.beans.PropertyChangeSupport.firePropertyChange(PropertyChangeSupport.java:276) |
---|
4333 | at java.awt.Component.firePropertyChange(Component.java:8255) |
---|
4334 | at java.awt.Component.firePropertyChange(Component.java:8368) |
---|
4335 | at org.openmicroscopy.shoola.util.ui.MacOSMenuHandler.quit(MacOSMenuHandler.java:105) |
---|
4336 | at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) |
---|
4337 | at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) |
---|
4338 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4339 | at java.lang.reflect.Method.invoke(Method.java:597) |
---|
4340 | at org.openmicroscopy.shoola.util.ui.OSMenuAdapter.callTarget(OSMenuAdapter.java:165) |
---|
4341 | at org.openmicroscopy.shoola.util.ui.OSMenuAdapter.invoke(OSMenuAdapter.java:216) |
---|
4342 | at sun.proxy.$Proxy0.handleQuit(Unknown Source) |
---|
4343 | at com.apple.eawt._AppEventLegacyHandler$7.dispatchEvent(_AppEventLegacyHandler.java:146) |
---|
4344 | at com.apple.eawt._AppEventLegacyHandler.sendEventToEachListenerUntilHandled(_AppEventLegacyHandler.java:168) |
---|
4345 | at com.apple.eawt._AppEventLegacyHandler.handleQuitRequestWith(_AppEventLegacyHandler.java:144) |
---|
4346 | at com.apple.eawt._AppEventHandler$_QuitDispatcher.performUsing(_AppEventHandler.java:387) |
---|
4347 | at com.apple.eawt._AppEventHandler$_QuitDispatcher.performUsing(_AppEventHandler.java:380) |
---|
4348 | at com.apple.eawt._AppEventHandler$_AppEventDispatcher$1.run(_AppEventHandler.java:489) |
---|
4349 | at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209) |
---|
4350 | at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:708) |
---|
4351 | at java.awt.EventQueue.access$400(EventQueue.java:82) |
---|
4352 | at java.awt.EventQueue$2.run(EventQueue.java:669) |
---|
4353 | at java.awt.EventQueue$2.run(EventQueue.java:667) |
---|
4354 | at java.security.AccessController.doPrivileged(Native Method) |
---|
4355 | at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87) |
---|
4356 | at java.awt.EventQueue.dispatchEvent(EventQueue.java:678) |
---|
4357 | at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296) |
---|
4358 | at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211) |
---|
4359 | at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201) |
---|
4360 | at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196) |
---|
4361 | at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188) |
---|
4362 | at java.awt.EventDispatchThread.run(EventDispatchThread.java:122) |
---|
4363 | Caused by: Ice.ConnectionLostException |
---|
4364 | error = 0 |
---|
4365 | at IceInternal.Outgoing.invoke(Outgoing.java:147) |
---|
4366 | at omero.api._ServiceFactoryDelM.getAdminService(_ServiceFactoryDelM.java:627) |
---|
4367 | at omero.api.ServiceFactoryPrxHelper.getAdminService(ServiceFactoryPrxHelper.java:705) |
---|
4368 | at omero.api.ServiceFactoryPrxHelper.getAdminService(ServiceFactoryPrxHelper.java:677) |
---|
4369 | at org.openmicroscopy.shoola.env.data.Connector.getAdminService(Connector.java:588) |
---|
4370 | at org.openmicroscopy.shoola.env.data.OMEROGateway.getAdminService(OMEROGateway.java:1614) |
---|
4371 | ... 41 more |
---|
4372 | Exception in thread "AWT-EventQueue-0" |
---|
4373 | |
---|
4374 | 2013-02-14 14:07:14,523 WARN [ ome.system.UpgradeCheck] (nitializer) UPGRADE AVAILABLE:Please upgrade to 4.4.6 See http://trac.openmicroscopy.org.uk/omero for the latest version |
---|
4375 | 2013-02-14 14:07:14,531 INFO [opy.shoola.env.rnd.PixelsServicesFactory] (nitializer) Heap memory usage: max 1060372480 |
---|
4376 | 2013-02-14 14:07:14,537 INFO [enmicroscopy.shoola.env.init.TaskBarInit] (nitializer) Loaded L&F: com.apple.laf.AquaLookAndFeel |
---|
4377 | 2013-02-14 14:07:16,069 INFO [copy.shoola.env.data.DataServicesFactory] (nitializer) Server version: 4.4.4 |
---|
4378 | Client version: 4.4.4-1274-b3d767a-dirty-ice33-b166 |
---|
4379 | os_name: Mac OS X |
---|
4380 | os_arch: x86_64 |
---|
4381 | java_version: 1.6.0_39 |
---|
4382 | os_version: 10.6.8 |
---|
4383 | |
---|
4384 | 2013-02-14 14:07:16,154 INFO [y.shoola.env.data.login.LoginServiceImpl] (nitializer) Logged onto OMERO at: gretzky.openmicroscopy.org.uk |
---|
4385 | User Name: user-2 -- Password: *** |
---|
4386 | |
---|
4387 | 2013-02-14 14:42:44,405 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4388 | Cannot start the Raw pixels store. |
---|
4389 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4390 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
4391 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
4392 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
4393 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4394 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4395 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4396 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4397 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4398 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4399 | at java.lang.Thread.run(Thread.java:680) |
---|
4400 | Caused by: omero.MissingPyramidException |
---|
4401 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/278_pyramid |
---|
4402 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
4403 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
4404 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
4405 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
4406 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
4407 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4408 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4409 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
4410 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
4411 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
4412 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
4413 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4414 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
4415 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
4416 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4417 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
4418 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4419 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
4420 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4421 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
4422 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4423 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
4424 | at $Proxy94.setPixelsId(Unknown Source) |
---|
4425 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
4426 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4427 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4428 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
4429 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
4430 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
4431 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
4432 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4433 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
4434 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4435 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
4436 | at $Proxy94.setPixelsId(Unknown Source) |
---|
4437 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
4438 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4439 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4440 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
4441 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
4442 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
4443 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
4444 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
4445 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
4446 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4447 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4448 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
4449 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
4450 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
4451 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
4452 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4453 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
4454 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
4455 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
4456 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
4457 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
4458 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
4459 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
4460 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
4461 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
4462 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
4463 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
4464 | " |
---|
4465 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
4466 | message = "Missing pyramid:/OMERO/Pixels/278_pyramid" |
---|
4467 | backOff = 713691 |
---|
4468 | pixelsID = 278 |
---|
4469 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
4470 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
4471 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
4472 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
4473 | at java.lang.Class.newInstance0(Class.java:357) |
---|
4474 | at java.lang.Class.newInstance(Class.java:310) |
---|
4475 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
4476 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
4477 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
4478 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
4479 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
4480 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
4481 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
4482 | ... 9 more |
---|
4483 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4484 | Cannot start the Raw pixels store. |
---|
4485 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4486 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
4487 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
4488 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
4489 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4490 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4491 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4492 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4493 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4494 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4495 | at java.lang.Thread.run(Thread.java:680) |
---|
4496 | Caused by: omero.MissingPyramidException |
---|
4497 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/278_pyramid |
---|
4498 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
4499 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
4500 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
4501 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
4502 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
4503 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4504 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4505 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
4506 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
4507 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
4508 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
4509 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4510 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
4511 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
4512 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4513 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
4514 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4515 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
4516 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4517 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
4518 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4519 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
4520 | at $Proxy94.setPixelsId(Unknown Source) |
---|
4521 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
4522 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4523 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4524 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
4525 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
4526 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
4527 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
4528 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4529 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
4530 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4531 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
4532 | at $Proxy94.setPixelsId(Unknown Source) |
---|
4533 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
4534 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4535 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4536 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
4537 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
4538 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
4539 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
4540 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
4541 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
4542 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4543 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4544 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
4545 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
4546 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
4547 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
4548 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4549 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
4550 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
4551 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
4552 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
4553 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
4554 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
4555 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
4556 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
4557 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
4558 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
4559 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
4560 | " |
---|
4561 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
4562 | message = "Missing pyramid:/OMERO/Pixels/278_pyramid" |
---|
4563 | backOff = 713691 |
---|
4564 | pixelsID = 278 |
---|
4565 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
4566 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
4567 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
4568 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
4569 | at java.lang.Class.newInstance0(Class.java:357) |
---|
4570 | at java.lang.Class.newInstance(Class.java:310) |
---|
4571 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
4572 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
4573 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
4574 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
4575 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
4576 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
4577 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
4578 | ... 9 more |
---|
4579 | Exception in thread "AWT-EventQueue-0" |
---|
4580 | |
---|
4581 | 2013-02-14 14:43:02,680 ERROR [y.shoola.agents.metadata.ImageSizeLoader] (entQueue-0) Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4582 | Cannot start the Raw pixels store. |
---|
4583 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4584 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
4585 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
4586 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
4587 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4588 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4589 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4590 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4591 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4592 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4593 | at java.lang.Thread.run(Thread.java:680) |
---|
4594 | Caused by: omero.MissingPyramidException |
---|
4595 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/285_pyramid |
---|
4596 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
4597 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
4598 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
4599 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
4600 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
4601 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4602 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4603 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
4604 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
4605 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
4606 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
4607 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4608 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
4609 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
4610 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4611 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
4612 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4613 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
4614 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4615 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
4616 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4617 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
4618 | at $Proxy94.setPixelsId(Unknown Source) |
---|
4619 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
4620 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4621 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4622 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
4623 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
4624 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
4625 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
4626 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4627 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
4628 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4629 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
4630 | at $Proxy94.setPixelsId(Unknown Source) |
---|
4631 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
4632 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4633 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4634 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
4635 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
4636 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
4637 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
4638 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
4639 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
4640 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4641 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4642 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
4643 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
4644 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
4645 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
4646 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4647 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
4648 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
4649 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
4650 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
4651 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
4652 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
4653 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
4654 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
4655 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
4656 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
4657 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
4658 | " |
---|
4659 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
4660 | message = "Missing pyramid:/OMERO/Pixels/285_pyramid" |
---|
4661 | backOff = 269616 |
---|
4662 | pixelsID = 285 |
---|
4663 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
4664 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
4665 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
4666 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
4667 | at java.lang.Class.newInstance0(Class.java:357) |
---|
4668 | at java.lang.Class.newInstance(Class.java:310) |
---|
4669 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
4670 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
4671 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
4672 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
4673 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
4674 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
4675 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
4676 | ... 9 more |
---|
4677 | Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. |
---|
4678 | Cannot start the Raw pixels store. |
---|
4679 | at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891) |
---|
4680 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8232) |
---|
4681 | at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.isLargeImage(OmeroImageServiceImpl.java:1926) |
---|
4682 | at org.openmicroscopy.shoola.env.data.views.calls.PixelsDataLoader$2.doCall(PixelsDataLoader.java:100) |
---|
4683 | at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) |
---|
4684 | at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) |
---|
4685 | at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) |
---|
4686 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) |
---|
4687 | at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) |
---|
4688 | at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) |
---|
4689 | at java.lang.Thread.run(Thread.java:680) |
---|
4690 | Caused by: omero.MissingPyramidException |
---|
4691 | serverStackTrace = "ome.conditions.MissingPyramidException: Missing pyramid:/OMERO/Pixels/285_pyramid |
---|
4692 | at ome.io.nio.SimpleBackOff.throwMissingPyramidException(SimpleBackOff.java:81) |
---|
4693 | at ome.io.nio.PixelsService.handleMissingPyramid(PixelsService.java:629) |
---|
4694 | at ome.io.nio.PixelsService.getPixelBuffer(PixelsService.java:440) |
---|
4695 | at ome.services.RawPixelsBean.setPixelsId(RawPixelsBean.java:279) |
---|
4696 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
4697 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4698 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4699 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
4700 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
4701 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
4702 | at ome.security.basic.EventHandler.invoke(EventHandler.java:154) |
---|
4703 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4704 | at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:218) |
---|
4705 | at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:202) |
---|
4706 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4707 | at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108) |
---|
4708 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4709 | at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:241) |
---|
4710 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4711 | at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:116) |
---|
4712 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4713 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
4714 | at $Proxy94.setPixelsId(Unknown Source) |
---|
4715 | at sun.reflect.GeneratedMethodAccessor1536.invoke(Unknown Source) |
---|
4716 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4717 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4718 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
4719 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
4720 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
4721 | at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:98) |
---|
4722 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4723 | at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) |
---|
4724 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4725 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
4726 | at $Proxy94.setPixelsId(Unknown Source) |
---|
4727 | at sun.reflect.GeneratedMethodAccessor2007.invoke(Unknown Source) |
---|
4728 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4729 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4730 | at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) |
---|
4731 | at ome.services.throttling.Callback.run(Callback.java:56) |
---|
4732 | at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) |
---|
4733 | at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:150) |
---|
4734 | at ome.services.blitz.impl.RawPixelsStoreI.setPixelsId_async(RawPixelsStoreI.java:194) |
---|
4735 | at sun.reflect.GeneratedMethodAccessor2006.invoke(Unknown Source) |
---|
4736 | at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) |
---|
4737 | at java.lang.reflect.Method.invoke(Method.java:592) |
---|
4738 | at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) |
---|
4739 | at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) |
---|
4740 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) |
---|
4741 | at omero.cmd.CallContext.invoke(CallContext.java:59) |
---|
4742 | at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) |
---|
4743 | at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) |
---|
4744 | at $Proxy95.setPixelsId_async(Unknown Source) |
---|
4745 | at omero.api._RawPixelsStoreTie.setPixelsId_async(_RawPixelsStoreTie.java:288) |
---|
4746 | at omero.api._RawPixelsStoreDisp.___setPixelsId(_RawPixelsStoreDisp.java:389) |
---|
4747 | at omero.api._RawPixelsStoreDisp.__dispatch(_RawPixelsStoreDisp.java:1338) |
---|
4748 | at IceInternal.Incoming.invoke(Incoming.java:159) |
---|
4749 | at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) |
---|
4750 | at Ice.ConnectionI.message(ConnectionI.java:972) |
---|
4751 | at IceInternal.ThreadPool.run(ThreadPool.java:577) |
---|
4752 | at IceInternal.ThreadPool.access$100(ThreadPool.java:12) |
---|
4753 | at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) |
---|
4754 | " |
---|
4755 | serverExceptionClass = "ome.conditions.MissingPyramidException" |
---|
4756 | message = "Missing pyramid:/OMERO/Pixels/285_pyramid" |
---|
4757 | backOff = 269616 |
---|
4758 | pixelsID = 285 |
---|
4759 | at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) |
---|
4760 | at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) |
---|
4761 | at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) |
---|
4762 | at java.lang.reflect.Constructor.newInstance(Constructor.java:513) |
---|
4763 | at java.lang.Class.newInstance0(Class.java:357) |
---|
4764 | at java.lang.Class.newInstance(Class.java:310) |
---|
4765 | at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243) |
---|
4766 | at IceInternal.BasicStream.throwException(BasicStream.java:1632) |
---|
4767 | at IceInternal.Outgoing.throwUserException(Outgoing.java:442) |
---|
4768 | at omero.api._RawPixelsStoreDelM.setPixelsId(_RawPixelsStoreDelM.java:1604) |
---|
4769 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2226) |
---|
4770 | at omero.api.RawPixelsStorePrxHelper.setPixelsId(RawPixelsStorePrxHelper.java:2198) |
---|
4771 | at org.openmicroscopy.shoola.env.data.OMEROGateway.isLargeImage(OMEROGateway.java:8227) |
---|
4772 | ... 9 more |
---|
4773 | Exception in thread "AWT-EventQueue-0" |
---|
4774 | |
---|