Task #12093 (closed)
Opened 10 years ago
Closed 10 years ago
BUG: Plates import not working
| Reported by: | pwalczysko | Owned by: | |
|---|---|---|---|
| Priority: | blocker | Milestone: | 5.1.0-m1 |
| Component: | Import | Version: | 5.1.0-m0 |
| Keywords: | n.a. | Cc: | ux@…, jamoore, jmoore, mlinkert-x, mlinkert |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | n.a. |
| Sprint: | n.a. |
Description
On develop branch, server trout.
When testing https://github.com/openmicroscopy/openmicroscopy/pull/2148, found out that import on plates on the merge build is not working. This means that:
Further problem: inability to really import any plates to trout (be it in-place or not). Also when trying via client, the result is the same. The plate just does not appear in Insight, although the cmd line output does not show breaks. This is being investigated by @melissalinkert and @joshmoore .
he correct reader is being used server-side, but no plates or wells are being registered at all....
/repositories/OMERO-5.1-merge-deploy/ManagedRepository/user-1_8/2014-03/07/17-10-57.056.log for reference.
Tested formats with this behaviour:
- bd-pathway
- cellworx
- flex
Change History (3)
comment:1 Changed 10 years ago by jamoore
comment:2 Changed 10 years ago by mlinkert
https://github.com/melissalinkert/bioformats/commit/0ed26588ed8c95d80567da9cc7eab481808fa85d added to https://github.com/openmicroscopy/bioformats/pull/859, which should resolve this.
comment:3 Changed 10 years ago by jamoore
- Resolution set to fixed
- Status changed from new to closed
Just tested on trout. thumbsup for Melissa's fix. See PR for further comments.
Note: Mark isolated the issue to PR https://github.com/openmicroscopy/bioformats/pull/859