Task #12144 (new)
Opened 10 years ago
Last modified 10 years ago
Bug : bug in Bio-Formats with LIF file — at Initial Version
| Reported by: | bramalingam | Owned by: | mlinkert |
|---|---|---|---|
| Priority: | minor | Milestone: | Unscheduled |
| Component: | General | Version: | 5.0.0 |
| Keywords: | n.a. | Cc: | r.a.hoebe@…, e.mackay@…, astout@…, mendelsm@…, rebecca.richardson@… |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | n.a. |
| Sprint: | n.a. |
Description
Location.mapFile: embedded-stream.raw -> null
FILE_EXCEPTION: /ome/data_repo/from_Biozentrum_Basel/Charles/SP5/01-31hpi-Experiment.lif
loci.formats.FormatException?: Invalid Memory Block: found magic bytes 0, expected 112
at loci.formats.in.LIFReader.initFile(LIFReader.java:416)
at loci.formats.FormatReader?.setId(FormatReader?.java:1319)
at loci.formats.ImageReader?.setId(ImageReader?.java:757)
at loci.formats.ReaderWrapper?.setId(ReaderWrapper?.java:573)
at loci.formats.ChannelFiller?.setId(ChannelFiller?.java:263)
at loci.formats.ReaderWrapper?.setId(ReaderWrapper?.java:573)
at loci.formats.ChannelSeparator?.setId(ChannelSeparator?.java:274)
at loci.formats.ReaderWrapper?.setId(ReaderWrapper?.java:573)
at loci.formats.Memoizer.setId(Memoizer.java:471)
at loci.formats.ReaderWrapper?.setId(ReaderWrapper?.java:573)
at ome.formats.importer.ImportCandidates?.singleFile(ImportCandidates?.java:414)
at ome.formats.importer.ImportCandidates?.handleFile(ImportCandidates?.java:595)
at org.apache.commons.io.DirectoryWalker?.walk(DirectoryWalker?.java:367)
at org.apache.commons.io.DirectoryWalker?.walk(DirectoryWalker?.java:335)
at ome.formats.importer.ImportCandidates?.execute(ImportCandidates?.java:368)
at ome.formats.importer.ImportCandidates?.<init>(ImportCandidates?.java:229)
SCANNING: Depth:0 Num: 2 Tot: 2 File: asel/Charles/SP5
2 file(s) parsed into 0 group(s) with 1 call(s) to setId in 68ms. (77ms total) [0 unknowns]
