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- Timestamp:
-
04/15/14 09:51:44 (10 years ago)
- Author:
-
bramalingam
- Comment:
-
Legend:
- Unmodified
- Added
- Removed
- Modified
-
-
Property
Milestone
changed from
Unscheduled
to
5.0.2
-
Property
Summary
changed from
BUG : Reading CZI files
to
BUG : Used file list incorrect for multi-file CZI datasets
-
|
initial
|
v2
|
|
| 14 | 14 | (Result : It groups files properly, imports the whole set as one dataset)- Expected result. |
| 15 | 15 | |
| | 16 | 2) paths |
| | 17 | |
| | 18 | paths = |
| | 19 | |
| | 20 | /ome/data_repo/from_Biozentrum_Basel/Charles/SPIM/large_timeseries_700GB/Image 17-24hpf-46hpf.czi |
| | 21 | |
| | 22 | candidates = handle(ImportCandidates(folder_depth_bioformats,reader, paths, handler)); |
| | 23 | |
| | 24 | candidates reads the files correctly (does not read every individual files within the folder), But, |
| | 25 | datasetno=candidates.getContainers().size; |
| | 26 | datasetno |
| | 27 | |
| | 28 | datasetno = |
| | 29 | |
| | 30 | 0 |
| 16 | 31 | |
| 17 | 32 | |
| | 33 | 3) Grouping of T seems to be wrong. Previous build (5.0 of bioformats) got the grouping of Z wrong as well. But that seems to be working properly now, |
| | 34 | paths = /ome/data_repo/from_Biozentrum_Basel/Charles/SPIM/multiview_single_timepoint_61GB/Image 12c.czi |
| | 35 | |
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