Warning: Can't synchronize with repository "(default)" (/home/git/ome.git does not appear to be a Git repository.). Look in the Trac log for more information.
Notice: In order to edit this ticket you need to be either: a Product Owner, The owner or the reporter of the ticket, or, in case of a Task not yet assigned, a team_member"

Task #4742 (closed)

Opened 13 years ago

Closed 13 years ago

Last modified 13 years ago

Tiff Writer int8 and uint8

Reported by: jburel Owned by: jburel
Priority: critical Milestone: OMERO-Beta4.3
Component: Bio-Formats Version: n.a.
Keywords: n.a. Cc: cxallan, jamoore
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: 0.0d
Sprint: 2011-03-24 (8)

Description (last modified by jburel)

Tests pass with int16 and uint16 but fail with int8 and unint8

Change History (5)

comment:1 Changed 13 years ago by jburel

  • Status changed from new to accepted

comment:2 Changed 13 years ago by jburel

  • Cc cxallan jmoore added; cxalln removed
  • Description modified (diff)
  • Fix issue with unint8
  • now problem with endianness.

comment:3 Changed 13 years ago by jburel <j.burel@…>

(In [d703fefd2b6787520b2af57ee5c9fc78b6fb14f5/bioformats.git]) Fix writing of compressed/uncompressed
unint8 block in TIFF. Endianness issue still not fixed. (see #4742)

comment:4 Changed 13 years ago by jburel

  • Description modified (diff)
  • Remaining Time changed from 0.75 to 0
  • Resolution set to fixed
  • Status changed from accepted to closed

not due to the ifd.isLittleEndian value but to the fact that the images have multiple channels.
Follow what is working:

  • read tile from specified plane (md5 m1) and compress.
  • write tile
  • read tile and decompress (md5 m2)
  • m1 = m2.
  • then the decompressed tile is passed to unpack method in TiffParser
  • the unpacked tile is returned (md5 m3)
  • m2 != m3.

Not sure we want to do more tests. Closing for now.

comment:5 Changed 13 years ago by jburel <j.burel@…>

(In [d703fefd2b6787520b2af57ee5c9fc78b6fb14f5/bioformats.git]) Fix writing of compressed/uncompressed
unint8 block in TIFF. Endianness issue still not fixed. (see #4742)

Note: See TracTickets for help on using tickets. You may also have a look at Agilo extensions to the ticket.

1.3.13-PRO © 2008-2011 Agilo Software all rights reserved (this page was served in: 0.66836 sec.)

We're Hiring!